Gene : Cagra.0380s0055 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10938:SF0 - TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIAL Genomic Order:  55
Name:  ? Cagra.0380s0055 Secondary Identifier:  ? PAC:28902088
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0055 0.5kb upstream 0.5kb upstream 2388 true Scaffold380: 207347-209734 Capsella grandiflora
Cagra.0380s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 209235-209734 Capsella grandiflora
Cagra.0380s0055 0.5kb downstream 0.5kb downstream 2388 true Scaffold380: 206847-209234 Capsella grandiflora
Cagra.0380s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 206847-207346 Capsella grandiflora
Cagra.0380s0055 1.0kb upstream 1.0kb upstream 2888 true Scaffold380: 207347-210234 Capsella grandiflora
Cagra.0380s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 209235-210234 Capsella grandiflora
Cagra.0380s0055 1.0kb downstream 1.0kb downstream 2888 true Scaffold380: 206347-209234 Capsella grandiflora
Cagra.0380s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 206347-207346 Capsella grandiflora
Cagra.0380s0055 2.0kb upstream 2.0kb upstream 3888 true Scaffold380: 207347-211234 Capsella grandiflora
Cagra.0380s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 209235-211234 Capsella grandiflora
Cagra.0380s0055 2.0kb downstream 2.0kb downstream 3888 true Scaffold380: 205347-209234 Capsella grandiflora
Cagra.0380s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 205347-207346 Capsella grandiflora
Cagra.0380s0055 5.0kb upstream 5.0kb upstream 6888 true Scaffold380: 207347-214234 Capsella grandiflora
Cagra.0380s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 209235-214234 Capsella grandiflora
Cagra.0380s0055 5.0kb downstream 5.0kb downstream 6888 true Scaffold380: 202347-209234 Capsella grandiflora
Cagra.0380s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 202347-207346 Capsella grandiflora
Cagra.0380s0055 10.0kb upstream 10.0kb upstream 11888 true Scaffold380: 207347-219234 Capsella grandiflora
Cagra.0380s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 209235-219234 Capsella grandiflora
Cagra.0380s0055 10.0kb downstream 10.0kb downstream 11888 true Scaffold380: 197347-209234 Capsella grandiflora
Cagra.0380s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 197347-207346 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370972 5261 Brassicaceae View MSA
123830704 5264 Brassicales-Malvales View MSA
124344071 5266 SBM View MSA
124245115 5268 Malvidae View MSA
124068567 5270 Rosid View MSA
123738585 5271 Pentapetalae View MSA
122786814 5272 Eudicot View MSA
122047018 5273 Angiosperm View MSA
121346506 5274 Embryophyte View MSA
123426932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain