Gene : Cagra.0391s0005 C. grandiflora v1.1
Defline:  (1 of 1) PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Genomic Order:  5
Name:  ? Cagra.0391s0005 Secondary Identifier:  ? PAC:28906874
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0391s0005 0.5kb upstream 0.5kb upstream 2891 true Scaffold391: 8717-11607 Capsella grandiflora
Cagra.0391s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold391: 8717-9216 Capsella grandiflora
Cagra.0391s0005 0.5kb downstream 0.5kb downstream 2891 true Scaffold391: 9217-12107 Capsella grandiflora
Cagra.0391s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold391: 11608-12107 Capsella grandiflora
Cagra.0391s0005 1.0kb upstream 1.0kb upstream 3391 true Scaffold391: 8217-11607 Capsella grandiflora
Cagra.0391s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold391: 8217-9216 Capsella grandiflora
Cagra.0391s0005 1.0kb downstream 1.0kb downstream 3391 true Scaffold391: 9217-12607 Capsella grandiflora
Cagra.0391s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold391: 11608-12607 Capsella grandiflora
Cagra.0391s0005 2.0kb upstream 2.0kb upstream 4391 true Scaffold391: 7217-11607 Capsella grandiflora
Cagra.0391s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold391: 7217-9216 Capsella grandiflora
Cagra.0391s0005 2.0kb downstream 2.0kb downstream 4391 true Scaffold391: 9217-13607 Capsella grandiflora
Cagra.0391s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold391: 11608-13607 Capsella grandiflora
Cagra.0391s0005 5.0kb upstream 5.0kb upstream 7391 true Scaffold391: 4217-11607 Capsella grandiflora
Cagra.0391s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold391: 4217-9216 Capsella grandiflora
Cagra.0391s0005 5.0kb downstream 5.0kb downstream 7391 true Scaffold391: 9217-16607 Capsella grandiflora
Cagra.0391s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold391: 11608-16607 Capsella grandiflora
Cagra.0391s0005 10.0kb upstream 10.0kb upstream 11607 true Scaffold391: 1-11607 Capsella grandiflora
Cagra.0391s0005 10.0kb upstream 10.0kb upstream 9216 false Scaffold391: 1-9216 Capsella grandiflora
Cagra.0391s0005 10.0kb downstream 10.0kb downstream 12391 true Scaffold391: 9217-21607 Capsella grandiflora
Cagra.0391s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold391: 11608-21607 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364408 5261 Brassicaceae View MSA
123833028 5264 Brassicales-Malvales View MSA
124345866 5266 SBM View MSA
124236918 5268 Malvidae View MSA
124064311 5270 Rosid View MSA
123738322 5271 Pentapetalae View MSA
122791068 5272 Eudicot View MSA
122042026 5273 Angiosperm View MSA
121345511 5274 Embryophyte View MSA
123424975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain