Gene : Cagra.0338s0019 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  19
Name:  ? Cagra.0338s0019 Secondary Identifier:  ? PAC:28902978
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0338s0019 0.5kb upstream 0.5kb upstream 2471 true Scaffold338: 83577-86047 Capsella grandiflora
Cagra.0338s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold338: 85548-86047 Capsella grandiflora
Cagra.0338s0019 0.5kb downstream 0.5kb downstream 2471 true Scaffold338: 83077-85547 Capsella grandiflora
Cagra.0338s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold338: 83077-83576 Capsella grandiflora
Cagra.0338s0019 1.0kb upstream 1.0kb upstream 2971 true Scaffold338: 83577-86547 Capsella grandiflora
Cagra.0338s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold338: 85548-86547 Capsella grandiflora
Cagra.0338s0019 1.0kb downstream 1.0kb downstream 2971 true Scaffold338: 82577-85547 Capsella grandiflora
Cagra.0338s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold338: 82577-83576 Capsella grandiflora
Cagra.0338s0019 2.0kb upstream 2.0kb upstream 3971 true Scaffold338: 83577-87547 Capsella grandiflora
Cagra.0338s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold338: 85548-87547 Capsella grandiflora
Cagra.0338s0019 2.0kb downstream 2.0kb downstream 3971 true Scaffold338: 81577-85547 Capsella grandiflora
Cagra.0338s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold338: 81577-83576 Capsella grandiflora
Cagra.0338s0019 5.0kb upstream 5.0kb upstream 6971 true Scaffold338: 83577-90547 Capsella grandiflora
Cagra.0338s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold338: 85548-90547 Capsella grandiflora
Cagra.0338s0019 5.0kb downstream 5.0kb downstream 6971 true Scaffold338: 78577-85547 Capsella grandiflora
Cagra.0338s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold338: 78577-83576 Capsella grandiflora
Cagra.0338s0019 10.0kb upstream 10.0kb upstream 11971 true Scaffold338: 83577-95547 Capsella grandiflora
Cagra.0338s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold338: 85548-95547 Capsella grandiflora
Cagra.0338s0019 10.0kb downstream 10.0kb downstream 11971 true Scaffold338: 73577-85547 Capsella grandiflora
Cagra.0338s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold338: 73577-83576 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122370271 5261 Brassicaceae View MSA
123799928 5264 Brassicales-Malvales View MSA
124297397 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain