Gene : Cagra.0342s0008 C. grandiflora v1.1
Defline:  (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 Genomic Order:  8
Name:  ? Cagra.0342s0008 Secondary Identifier:  ? PAC:28909896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0008 0.5kb upstream 0.5kb upstream 2275 true Scaffold342: 26233-28507 Capsella grandiflora
Cagra.0342s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 28008-28507 Capsella grandiflora
Cagra.0342s0008 0.5kb downstream 0.5kb downstream 2275 true Scaffold342: 25733-28007 Capsella grandiflora
Cagra.0342s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 25733-26232 Capsella grandiflora
Cagra.0342s0008 1.0kb upstream 1.0kb upstream 2775 true Scaffold342: 26233-29007 Capsella grandiflora
Cagra.0342s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 28008-29007 Capsella grandiflora
Cagra.0342s0008 1.0kb downstream 1.0kb downstream 2775 true Scaffold342: 25233-28007 Capsella grandiflora
Cagra.0342s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 25233-26232 Capsella grandiflora
Cagra.0342s0008 2.0kb upstream 2.0kb upstream 3775 true Scaffold342: 26233-30007 Capsella grandiflora
Cagra.0342s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 28008-30007 Capsella grandiflora
Cagra.0342s0008 2.0kb downstream 2.0kb downstream 3775 true Scaffold342: 24233-28007 Capsella grandiflora
Cagra.0342s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 24233-26232 Capsella grandiflora
Cagra.0342s0008 5.0kb upstream 5.0kb upstream 6775 true Scaffold342: 26233-33007 Capsella grandiflora
Cagra.0342s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 28008-33007 Capsella grandiflora
Cagra.0342s0008 5.0kb downstream 5.0kb downstream 6775 true Scaffold342: 21233-28007 Capsella grandiflora
Cagra.0342s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 21233-26232 Capsella grandiflora
Cagra.0342s0008 10.0kb upstream 10.0kb upstream 11775 true Scaffold342: 26233-38007 Capsella grandiflora
Cagra.0342s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 28008-38007 Capsella grandiflora
Cagra.0342s0008 10.0kb downstream 10.0kb downstream 11775 true Scaffold342: 16233-28007 Capsella grandiflora
Cagra.0342s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 16233-26232 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369826 5261 Brassicaceae View MSA
123831514 5264 Brassicales-Malvales View MSA
124343758 5266 SBM View MSA
124241457 5268 Malvidae View MSA
124062758 5270 Rosid View MSA
123738854 5271 Pentapetalae View MSA
122785939 5272 Eudicot View MSA
122041890 5273 Angiosperm View MSA
121349502 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain