Gene : Cagra.0342s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22846 - WD40 REPEAT PROTEIN Genomic Order:  18
Name:  ? Cagra.0342s0018 Secondary Identifier:  ? PAC:28909943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0018 0.5kb upstream 0.5kb upstream 4494 true Scaffold342: 62054-66547 Capsella grandiflora
Cagra.0342s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 62054-62553 Capsella grandiflora
Cagra.0342s0018 0.5kb downstream 0.5kb downstream 4494 true Scaffold342: 62554-67047 Capsella grandiflora
Cagra.0342s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 66548-67047 Capsella grandiflora
Cagra.0342s0018 1.0kb upstream 1.0kb upstream 4994 true Scaffold342: 61554-66547 Capsella grandiflora
Cagra.0342s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 61554-62553 Capsella grandiflora
Cagra.0342s0018 1.0kb downstream 1.0kb downstream 4994 true Scaffold342: 62554-67547 Capsella grandiflora
Cagra.0342s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 66548-67547 Capsella grandiflora
Cagra.0342s0018 2.0kb upstream 2.0kb upstream 5994 true Scaffold342: 60554-66547 Capsella grandiflora
Cagra.0342s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 60554-62553 Capsella grandiflora
Cagra.0342s0018 2.0kb downstream 2.0kb downstream 5994 true Scaffold342: 62554-68547 Capsella grandiflora
Cagra.0342s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 66548-68547 Capsella grandiflora
Cagra.0342s0018 5.0kb upstream 5.0kb upstream 8994 true Scaffold342: 57554-66547 Capsella grandiflora
Cagra.0342s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 57554-62553 Capsella grandiflora
Cagra.0342s0018 5.0kb downstream 5.0kb downstream 8994 true Scaffold342: 62554-71547 Capsella grandiflora
Cagra.0342s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 66548-71547 Capsella grandiflora
Cagra.0342s0018 10.0kb upstream 10.0kb upstream 13994 true Scaffold342: 52554-66547 Capsella grandiflora
Cagra.0342s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 52554-62553 Capsella grandiflora
Cagra.0342s0018 10.0kb downstream 10.0kb downstream 13994 true Scaffold342: 62554-76547 Capsella grandiflora
Cagra.0342s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 66548-76547 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369994 5261 Brassicaceae View MSA
123838977 5264 Brassicales-Malvales View MSA
124339035 5266 SBM View MSA
124242589 5268 Malvidae View MSA
124060920 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain