Gene : Cagra.0568s0083 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21528:SF0 - NOGO-B RECEPTOR Genomic Order:  83
Name:  ? Cagra.0568s0083 Secondary Identifier:  ? PAC:28910932
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6129 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0083 0.5kb upstream 0.5kb upstream 3099 true Scaffold568: 275176-278274 Capsella grandiflora
Cagra.0568s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 277775-278274 Capsella grandiflora
Cagra.0568s0083 0.5kb downstream 0.5kb downstream 3099 true Scaffold568: 274676-277774 Capsella grandiflora
Cagra.0568s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 274676-275175 Capsella grandiflora
Cagra.0568s0083 1.0kb upstream 1.0kb upstream 3599 true Scaffold568: 275176-278774 Capsella grandiflora
Cagra.0568s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 277775-278774 Capsella grandiflora
Cagra.0568s0083 1.0kb downstream 1.0kb downstream 3599 true Scaffold568: 274176-277774 Capsella grandiflora
Cagra.0568s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 274176-275175 Capsella grandiflora
Cagra.0568s0083 2.0kb upstream 2.0kb upstream 4599 true Scaffold568: 275176-279774 Capsella grandiflora
Cagra.0568s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 277775-279774 Capsella grandiflora
Cagra.0568s0083 2.0kb downstream 2.0kb downstream 4599 true Scaffold568: 273176-277774 Capsella grandiflora
Cagra.0568s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 273176-275175 Capsella grandiflora
Cagra.0568s0083 5.0kb upstream 5.0kb upstream 7599 true Scaffold568: 275176-282774 Capsella grandiflora
Cagra.0568s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 277775-282774 Capsella grandiflora
Cagra.0568s0083 5.0kb downstream 5.0kb downstream 7599 true Scaffold568: 270176-277774 Capsella grandiflora
Cagra.0568s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 270176-275175 Capsella grandiflora
Cagra.0568s0083 10.0kb upstream 10.0kb upstream 12599 true Scaffold568: 275176-287774 Capsella grandiflora
Cagra.0568s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 277775-287774 Capsella grandiflora
Cagra.0568s0083 10.0kb downstream 10.0kb downstream 12599 true Scaffold568: 265176-277774 Capsella grandiflora
Cagra.0568s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 265176-275175 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366386 5261 Brassicaceae View MSA
123840405 5264 Brassicales-Malvales View MSA
124342513 5266 SBM View MSA
124238686 5268 Malvidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain