Gene : Cagra.0568s0106 C. grandiflora v1.1
Defline:  (1 of 5) PTHR13018:SF47 - ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  106
Name:  ? Cagra.0568s0106 Secondary Identifier:  ? PAC:28910876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0106 0.5kb upstream 0.5kb upstream 4333 true Scaffold568: 348280-352612 Capsella grandiflora
Cagra.0568s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 352113-352612 Capsella grandiflora
Cagra.0568s0106 0.5kb downstream 0.5kb downstream 4333 true Scaffold568: 347780-352112 Capsella grandiflora
Cagra.0568s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 347780-348279 Capsella grandiflora
Cagra.0568s0106 1.0kb upstream 1.0kb upstream 4833 true Scaffold568: 348280-353112 Capsella grandiflora
Cagra.0568s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 352113-353112 Capsella grandiflora
Cagra.0568s0106 1.0kb downstream 1.0kb downstream 4833 true Scaffold568: 347280-352112 Capsella grandiflora
Cagra.0568s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 347280-348279 Capsella grandiflora
Cagra.0568s0106 2.0kb upstream 2.0kb upstream 5833 true Scaffold568: 348280-354112 Capsella grandiflora
Cagra.0568s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 352113-354112 Capsella grandiflora
Cagra.0568s0106 2.0kb downstream 2.0kb downstream 5833 true Scaffold568: 346280-352112 Capsella grandiflora
Cagra.0568s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 346280-348279 Capsella grandiflora
Cagra.0568s0106 5.0kb upstream 5.0kb upstream 8833 true Scaffold568: 348280-357112 Capsella grandiflora
Cagra.0568s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 352113-357112 Capsella grandiflora
Cagra.0568s0106 5.0kb downstream 5.0kb downstream 8833 true Scaffold568: 343280-352112 Capsella grandiflora
Cagra.0568s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 343280-348279 Capsella grandiflora
Cagra.0568s0106 10.0kb upstream 10.0kb upstream 13833 true Scaffold568: 348280-362112 Capsella grandiflora
Cagra.0568s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 352113-362112 Capsella grandiflora
Cagra.0568s0106 10.0kb downstream 10.0kb downstream 13833 true Scaffold568: 338280-352112 Capsella grandiflora
Cagra.0568s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 338280-348279 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369580 5261 Brassicaceae View MSA
123799801 5264 Brassicales-Malvales View MSA
124297286 5266 SBM View MSA
124149218 5268 Malvidae View MSA
124067604 5270 Rosid View MSA
123747702 5271 Pentapetalae View MSA
122790642 5272 Eudicot View MSA
122047982 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain