Gene : Cagra.0566s0018 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10722 - 60S RIBOSOMAL PROTEIN L19 Genomic Order:  18
Name:  ? Cagra.0566s0018 Secondary Identifier:  ? PAC:28918643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0566s0018 0.5kb upstream 0.5kb upstream 2070 true Scaffold566: 53180-55249 Capsella grandiflora
Cagra.0566s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold566: 54750-55249 Capsella grandiflora
Cagra.0566s0018 0.5kb downstream 0.5kb downstream 2070 true Scaffold566: 52680-54749 Capsella grandiflora
Cagra.0566s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold566: 52680-53179 Capsella grandiflora
Cagra.0566s0018 1.0kb upstream 1.0kb upstream 2570 true Scaffold566: 53180-55749 Capsella grandiflora
Cagra.0566s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold566: 54750-55749 Capsella grandiflora
Cagra.0566s0018 1.0kb downstream 1.0kb downstream 2570 true Scaffold566: 52180-54749 Capsella grandiflora
Cagra.0566s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold566: 52180-53179 Capsella grandiflora
Cagra.0566s0018 2.0kb upstream 2.0kb upstream 3570 true Scaffold566: 53180-56749 Capsella grandiflora
Cagra.0566s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold566: 54750-56749 Capsella grandiflora
Cagra.0566s0018 2.0kb downstream 2.0kb downstream 3570 true Scaffold566: 51180-54749 Capsella grandiflora
Cagra.0566s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold566: 51180-53179 Capsella grandiflora
Cagra.0566s0018 5.0kb upstream 5.0kb upstream 6570 true Scaffold566: 53180-59749 Capsella grandiflora
Cagra.0566s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold566: 54750-59749 Capsella grandiflora
Cagra.0566s0018 5.0kb downstream 5.0kb downstream 6570 true Scaffold566: 48180-54749 Capsella grandiflora
Cagra.0566s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold566: 48180-53179 Capsella grandiflora
Cagra.0566s0018 10.0kb upstream 10.0kb upstream 11570 true Scaffold566: 53180-64749 Capsella grandiflora
Cagra.0566s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold566: 54750-64749 Capsella grandiflora
Cagra.0566s0018 10.0kb downstream 10.0kb downstream 11570 true Scaffold566: 43180-54749 Capsella grandiflora
Cagra.0566s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold566: 43180-53179 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378919 5261 Brassicaceae View MSA
123840368 5264 Brassicales-Malvales View MSA
124338923 5266 SBM View MSA
124246613 5268 Malvidae View MSA
124062406 5270 Rosid View MSA
123746548 5271 Pentapetalae View MSA
122795809 5272 Eudicot View MSA
122045144 5273 Angiosperm View MSA
121346748 5274 Embryophyte View MSA
123428103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain