Gene : Cagra.0568s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10799:SF705 - SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  9
Name:  ? Cagra.0568s0009 Secondary Identifier:  ? PAC:28911066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0009 0.5kb upstream 0.5kb upstream 5809 true Scaffold568: 33370-39178 Capsella grandiflora
Cagra.0568s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 38679-39178 Capsella grandiflora
Cagra.0568s0009 0.5kb downstream 0.5kb downstream 5809 true Scaffold568: 32870-38678 Capsella grandiflora
Cagra.0568s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 32870-33369 Capsella grandiflora
Cagra.0568s0009 1.0kb upstream 1.0kb upstream 6309 true Scaffold568: 33370-39678 Capsella grandiflora
Cagra.0568s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 38679-39678 Capsella grandiflora
Cagra.0568s0009 1.0kb downstream 1.0kb downstream 6309 true Scaffold568: 32370-38678 Capsella grandiflora
Cagra.0568s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 32370-33369 Capsella grandiflora
Cagra.0568s0009 2.0kb upstream 2.0kb upstream 7309 true Scaffold568: 33370-40678 Capsella grandiflora
Cagra.0568s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 38679-40678 Capsella grandiflora
Cagra.0568s0009 2.0kb downstream 2.0kb downstream 7309 true Scaffold568: 31370-38678 Capsella grandiflora
Cagra.0568s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 31370-33369 Capsella grandiflora
Cagra.0568s0009 5.0kb upstream 5.0kb upstream 10309 true Scaffold568: 33370-43678 Capsella grandiflora
Cagra.0568s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 38679-43678 Capsella grandiflora
Cagra.0568s0009 5.0kb downstream 5.0kb downstream 10309 true Scaffold568: 28370-38678 Capsella grandiflora
Cagra.0568s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 28370-33369 Capsella grandiflora
Cagra.0568s0009 10.0kb upstream 10.0kb upstream 15309 true Scaffold568: 33370-48678 Capsella grandiflora
Cagra.0568s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 38679-48678 Capsella grandiflora
Cagra.0568s0009 10.0kb downstream 10.0kb downstream 15309 true Scaffold568: 23370-38678 Capsella grandiflora
Cagra.0568s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 23370-33369 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343234 5261 Brassicaceae View MSA
123783492 5264 Brassicales-Malvales View MSA
124281723 5266 SBM View MSA
124136433 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain