Gene : Cagra.0558s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22814:SF100 - HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  9
Name:  ? Cagra.0558s0009 Secondary Identifier:  ? PAC:28894461
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0558s0009 0.5kb upstream 0.5kb upstream 2351 true Scaffold558: 47880-50230 Capsella grandiflora
Cagra.0558s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold558: 47880-48379 Capsella grandiflora
Cagra.0558s0009 0.5kb downstream 0.5kb downstream 2351 true Scaffold558: 48380-50730 Capsella grandiflora
Cagra.0558s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold558: 50231-50730 Capsella grandiflora
Cagra.0558s0009 1.0kb upstream 1.0kb upstream 2851 true Scaffold558: 47380-50230 Capsella grandiflora
Cagra.0558s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold558: 47380-48379 Capsella grandiflora
Cagra.0558s0009 1.0kb downstream 1.0kb downstream 2851 true Scaffold558: 48380-51230 Capsella grandiflora
Cagra.0558s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold558: 50231-51230 Capsella grandiflora
Cagra.0558s0009 2.0kb upstream 2.0kb upstream 3851 true Scaffold558: 46380-50230 Capsella grandiflora
Cagra.0558s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold558: 46380-48379 Capsella grandiflora
Cagra.0558s0009 2.0kb downstream 2.0kb downstream 3851 true Scaffold558: 48380-52230 Capsella grandiflora
Cagra.0558s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold558: 50231-52230 Capsella grandiflora
Cagra.0558s0009 5.0kb upstream 5.0kb upstream 6851 true Scaffold558: 43380-50230 Capsella grandiflora
Cagra.0558s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold558: 43380-48379 Capsella grandiflora
Cagra.0558s0009 5.0kb downstream 5.0kb downstream 6851 true Scaffold558: 48380-55230 Capsella grandiflora
Cagra.0558s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold558: 50231-55230 Capsella grandiflora
Cagra.0558s0009 10.0kb upstream 10.0kb upstream 11851 true Scaffold558: 38380-50230 Capsella grandiflora
Cagra.0558s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold558: 38380-48379 Capsella grandiflora
Cagra.0558s0009 10.0kb downstream 10.0kb downstream 11851 true Scaffold558: 48380-60230 Capsella grandiflora
Cagra.0558s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold558: 50231-60230 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375584 5261 Brassicaceae View MSA
123839435 5264 Brassicales-Malvales View MSA
124340287 5266 SBM View MSA
124251501 5268 Malvidae View MSA
124063094 5270 Rosid View MSA
123746961 5271 Pentapetalae View MSA
122796317 5272 Eudicot View MSA
122045466 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain