Gene : Cagra.0562s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11654//PTHR11654:SF125 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  5
Name:  ? Cagra.0562s0005 Secondary Identifier:  ? PAC:28910799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0005 0.5kb upstream 0.5kb upstream 3491 true Scaffold562: 10035-13525 Capsella grandiflora
Cagra.0562s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 13026-13525 Capsella grandiflora
Cagra.0562s0005 0.5kb downstream 0.5kb downstream 3491 true Scaffold562: 9535-13025 Capsella grandiflora
Cagra.0562s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 9535-10034 Capsella grandiflora
Cagra.0562s0005 1.0kb upstream 1.0kb upstream 3991 true Scaffold562: 10035-14025 Capsella grandiflora
Cagra.0562s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 13026-14025 Capsella grandiflora
Cagra.0562s0005 1.0kb downstream 1.0kb downstream 3991 true Scaffold562: 9035-13025 Capsella grandiflora
Cagra.0562s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 9035-10034 Capsella grandiflora
Cagra.0562s0005 2.0kb upstream 2.0kb upstream 4991 true Scaffold562: 10035-15025 Capsella grandiflora
Cagra.0562s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 13026-15025 Capsella grandiflora
Cagra.0562s0005 2.0kb downstream 2.0kb downstream 4991 true Scaffold562: 8035-13025 Capsella grandiflora
Cagra.0562s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 8035-10034 Capsella grandiflora
Cagra.0562s0005 5.0kb upstream 5.0kb upstream 7991 true Scaffold562: 10035-18025 Capsella grandiflora
Cagra.0562s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 13026-18025 Capsella grandiflora
Cagra.0562s0005 5.0kb downstream 5.0kb downstream 7991 true Scaffold562: 5035-13025 Capsella grandiflora
Cagra.0562s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 5035-10034 Capsella grandiflora
Cagra.0562s0005 10.0kb upstream 10.0kb upstream 12991 true Scaffold562: 10035-23025 Capsella grandiflora
Cagra.0562s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 13026-23025 Capsella grandiflora
Cagra.0562s0005 10.0kb downstream 10.0kb downstream 12991 true Scaffold562: 35-13025 Capsella grandiflora
Cagra.0562s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 35-10034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362911 5261 Brassicaceae View MSA
123836861 5264 Brassicales-Malvales View MSA
124340673 5266 SBM View MSA
124246059 5268 Malvidae View MSA
124065888 5270 Rosid View MSA
123751146 5271 Pentapetalae View MSA
122796632 5272 Eudicot View MSA
122045333 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain