Gene : Cagra.0562s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11945:SF219 - FLORAL HOMEOTIC PROTEIN APETALA 3 Genomic Order:  25
Name:  ? Cagra.0562s0025 Secondary Identifier:  ? PAC:28910774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0025 0.5kb upstream 0.5kb upstream 2170 true Scaffold562: 91341-93510 Capsella grandiflora
Cagra.0562s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 93011-93510 Capsella grandiflora
Cagra.0562s0025 0.5kb downstream 0.5kb downstream 2170 true Scaffold562: 90841-93010 Capsella grandiflora
Cagra.0562s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 90841-91340 Capsella grandiflora
Cagra.0562s0025 1.0kb upstream 1.0kb upstream 2670 true Scaffold562: 91341-94010 Capsella grandiflora
Cagra.0562s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 93011-94010 Capsella grandiflora
Cagra.0562s0025 1.0kb downstream 1.0kb downstream 2670 true Scaffold562: 90341-93010 Capsella grandiflora
Cagra.0562s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 90341-91340 Capsella grandiflora
Cagra.0562s0025 2.0kb upstream 2.0kb upstream 3670 true Scaffold562: 91341-95010 Capsella grandiflora
Cagra.0562s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 93011-95010 Capsella grandiflora
Cagra.0562s0025 2.0kb downstream 2.0kb downstream 3670 true Scaffold562: 89341-93010 Capsella grandiflora
Cagra.0562s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 89341-91340 Capsella grandiflora
Cagra.0562s0025 5.0kb upstream 5.0kb upstream 6670 true Scaffold562: 91341-98010 Capsella grandiflora
Cagra.0562s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 93011-98010 Capsella grandiflora
Cagra.0562s0025 5.0kb downstream 5.0kb downstream 6670 true Scaffold562: 86341-93010 Capsella grandiflora
Cagra.0562s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 86341-91340 Capsella grandiflora
Cagra.0562s0025 10.0kb upstream 10.0kb upstream 11670 true Scaffold562: 91341-103010 Capsella grandiflora
Cagra.0562s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 93011-103010 Capsella grandiflora
Cagra.0562s0025 10.0kb downstream 10.0kb downstream 11670 true Scaffold562: 81341-93010 Capsella grandiflora
Cagra.0562s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 81341-91340 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362490 5261 Brassicaceae View MSA
123833359 5264 Brassicales-Malvales View MSA
124348542 5266 SBM View MSA
124247022 5268 Malvidae View MSA
124071528 5270 Rosid View MSA
123747185 5271 Pentapetalae View MSA
122794431 5272 Eudicot View MSA
122047951 5273 Angiosperm View MSA
121310821 5274 Embryophyte View MSA
123348212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain