Gene : Cagra.0562s0047 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23430:SF76 - HISTONE H2A VARIANT 1-RELATED Genomic Order:  47
Name:  ? Cagra.0562s0047 Secondary Identifier:  ? PAC:28910802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0047 0.5kb upstream 0.5kb upstream 1995 true Scaffold562: 169754-171748 Capsella grandiflora
Cagra.0562s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 169754-170253 Capsella grandiflora
Cagra.0562s0047 0.5kb downstream 0.5kb downstream 1995 true Scaffold562: 170254-172248 Capsella grandiflora
Cagra.0562s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 171749-172248 Capsella grandiflora
Cagra.0562s0047 1.0kb upstream 1.0kb upstream 2495 true Scaffold562: 169254-171748 Capsella grandiflora
Cagra.0562s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 169254-170253 Capsella grandiflora
Cagra.0562s0047 1.0kb downstream 1.0kb downstream 2495 true Scaffold562: 170254-172748 Capsella grandiflora
Cagra.0562s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 171749-172748 Capsella grandiflora
Cagra.0562s0047 2.0kb upstream 2.0kb upstream 3495 true Scaffold562: 168254-171748 Capsella grandiflora
Cagra.0562s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 168254-170253 Capsella grandiflora
Cagra.0562s0047 2.0kb downstream 2.0kb downstream 3495 true Scaffold562: 170254-173748 Capsella grandiflora
Cagra.0562s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 171749-173748 Capsella grandiflora
Cagra.0562s0047 5.0kb upstream 5.0kb upstream 6495 true Scaffold562: 165254-171748 Capsella grandiflora
Cagra.0562s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 165254-170253 Capsella grandiflora
Cagra.0562s0047 5.0kb downstream 5.0kb downstream 6495 true Scaffold562: 170254-176748 Capsella grandiflora
Cagra.0562s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 171749-176748 Capsella grandiflora
Cagra.0562s0047 10.0kb upstream 10.0kb upstream 11495 true Scaffold562: 160254-171748 Capsella grandiflora
Cagra.0562s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 160254-170253 Capsella grandiflora
Cagra.0562s0047 10.0kb downstream 10.0kb downstream 11495 true Scaffold562: 170254-181748 Capsella grandiflora
Cagra.0562s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 171749-181748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375662 5261 Brassicaceae View MSA
123835739 5264 Brassicales-Malvales View MSA
124342501 5266 SBM View MSA
124252966 5268 Malvidae View MSA
124071352 5270 Rosid View MSA
123749587 5271 Pentapetalae View MSA
122785634 5272 Eudicot View MSA
122050961 5273 Angiosperm View MSA
121349814 5274 Embryophyte View MSA
123424347 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain