Gene : Cagra.0542s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13166:SF7 - LYR MOTIF-CONTAINING PROTEIN 4 Genomic Order:  14
Name:  ? Cagra.0542s0014 Secondary Identifier:  ? PAC:28916815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0014 0.5kb upstream 0.5kb upstream 1891 true Scaffold542: 61396-63286 Capsella grandiflora
Cagra.0542s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 62787-63286 Capsella grandiflora
Cagra.0542s0014 0.5kb downstream 0.5kb downstream 1891 true Scaffold542: 60896-62786 Capsella grandiflora
Cagra.0542s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 60896-61395 Capsella grandiflora
Cagra.0542s0014 1.0kb upstream 1.0kb upstream 2391 true Scaffold542: 61396-63786 Capsella grandiflora
Cagra.0542s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 62787-63786 Capsella grandiflora
Cagra.0542s0014 1.0kb downstream 1.0kb downstream 2391 true Scaffold542: 60396-62786 Capsella grandiflora
Cagra.0542s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 60396-61395 Capsella grandiflora
Cagra.0542s0014 2.0kb upstream 2.0kb upstream 3391 true Scaffold542: 61396-64786 Capsella grandiflora
Cagra.0542s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 62787-64786 Capsella grandiflora
Cagra.0542s0014 2.0kb downstream 2.0kb downstream 3391 true Scaffold542: 59396-62786 Capsella grandiflora
Cagra.0542s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 59396-61395 Capsella grandiflora
Cagra.0542s0014 5.0kb upstream 5.0kb upstream 6391 true Scaffold542: 61396-67786 Capsella grandiflora
Cagra.0542s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 62787-67786 Capsella grandiflora
Cagra.0542s0014 5.0kb downstream 5.0kb downstream 6391 true Scaffold542: 56396-62786 Capsella grandiflora
Cagra.0542s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 56396-61395 Capsella grandiflora
Cagra.0542s0014 10.0kb upstream 10.0kb upstream 11391 true Scaffold542: 61396-72786 Capsella grandiflora
Cagra.0542s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 62787-72786 Capsella grandiflora
Cagra.0542s0014 10.0kb downstream 10.0kb downstream 11391 true Scaffold542: 51396-62786 Capsella grandiflora
Cagra.0542s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 51396-61395 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377978 5261 Brassicaceae View MSA
123838078 5264 Brassicales-Malvales View MSA
124322392 5266 SBM View MSA
124237837 5268 Malvidae View MSA
124061407 5270 Rosid View MSA
123753120 5271 Pentapetalae View MSA
122790951 5272 Eudicot View MSA
122044575 5273 Angiosperm View MSA
121346889 5274 Embryophyte View MSA
123426954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain