Gene : Cagra.0542s0032 C. grandiflora v1.1
Defline:  (1 of 5) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  32
Name:  ? Cagra.0542s0032 Secondary Identifier:  ? PAC:28916780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0032 0.5kb upstream 0.5kb upstream 2795 true Scaffold542: 113930-116724 Capsella grandiflora
Cagra.0542s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 116225-116724 Capsella grandiflora
Cagra.0542s0032 0.5kb downstream 0.5kb downstream 2795 true Scaffold542: 113430-116224 Capsella grandiflora
Cagra.0542s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 113430-113929 Capsella grandiflora
Cagra.0542s0032 1.0kb upstream 1.0kb upstream 3295 true Scaffold542: 113930-117224 Capsella grandiflora
Cagra.0542s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 116225-117224 Capsella grandiflora
Cagra.0542s0032 1.0kb downstream 1.0kb downstream 3295 true Scaffold542: 112930-116224 Capsella grandiflora
Cagra.0542s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 112930-113929 Capsella grandiflora
Cagra.0542s0032 2.0kb upstream 2.0kb upstream 4295 true Scaffold542: 113930-118224 Capsella grandiflora
Cagra.0542s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 116225-118224 Capsella grandiflora
Cagra.0542s0032 2.0kb downstream 2.0kb downstream 4295 true Scaffold542: 111930-116224 Capsella grandiflora
Cagra.0542s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 111930-113929 Capsella grandiflora
Cagra.0542s0032 5.0kb upstream 5.0kb upstream 7295 true Scaffold542: 113930-121224 Capsella grandiflora
Cagra.0542s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 116225-121224 Capsella grandiflora
Cagra.0542s0032 5.0kb downstream 5.0kb downstream 7295 true Scaffold542: 108930-116224 Capsella grandiflora
Cagra.0542s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 108930-113929 Capsella grandiflora
Cagra.0542s0032 10.0kb upstream 10.0kb upstream 12295 true Scaffold542: 113930-126224 Capsella grandiflora
Cagra.0542s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 116225-126224 Capsella grandiflora
Cagra.0542s0032 10.0kb downstream 10.0kb downstream 12295 true Scaffold542: 103930-116224 Capsella grandiflora
Cagra.0542s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 103930-113929 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364922 5261 Brassicaceae View MSA
123835706 5264 Brassicales-Malvales View MSA
124342135 5266 SBM View MSA
124245677 5268 Malvidae View MSA
124064208 5270 Rosid View MSA
123738058 5271 Pentapetalae View MSA
122790887 5272 Eudicot View MSA
122046626 5273 Angiosperm View MSA
121346435 5274 Embryophyte View MSA
123380384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain