Gene : Cagra.0535s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12049:SF7 - NADH DEHYDROGENASE [UBIQUINONE] COMPLEX I, ASSEMBLY FACTOR 7 Genomic Order:  1
Name:  ? Cagra.0535s0001 Secondary Identifier:  ? PAC:28913814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0535s0001 0.5kb upstream 0.5kb upstream 2883 true Scaffold535: 3563-6445 Capsella grandiflora
Cagra.0535s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold535: 3563-4062 Capsella grandiflora
Cagra.0535s0001 0.5kb downstream 0.5kb downstream 2883 true Scaffold535: 4063-6945 Capsella grandiflora
Cagra.0535s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold535: 6446-6945 Capsella grandiflora
Cagra.0535s0001 1.0kb upstream 1.0kb upstream 3383 true Scaffold535: 3063-6445 Capsella grandiflora
Cagra.0535s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold535: 3063-4062 Capsella grandiflora
Cagra.0535s0001 1.0kb downstream 1.0kb downstream 3383 true Scaffold535: 4063-7445 Capsella grandiflora
Cagra.0535s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold535: 6446-7445 Capsella grandiflora
Cagra.0535s0001 2.0kb upstream 2.0kb upstream 4383 true Scaffold535: 2063-6445 Capsella grandiflora
Cagra.0535s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold535: 2063-4062 Capsella grandiflora
Cagra.0535s0001 2.0kb downstream 2.0kb downstream 4383 true Scaffold535: 4063-8445 Capsella grandiflora
Cagra.0535s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold535: 6446-8445 Capsella grandiflora
Cagra.0535s0001 5.0kb upstream 5.0kb upstream 6445 true Scaffold535: 1-6445 Capsella grandiflora
Cagra.0535s0001 5.0kb upstream 5.0kb upstream 4062 false Scaffold535: 1-4062 Capsella grandiflora
Cagra.0535s0001 5.0kb downstream 5.0kb downstream 7383 true Scaffold535: 4063-11445 Capsella grandiflora
Cagra.0535s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold535: 6446-11445 Capsella grandiflora
Cagra.0535s0001 10.0kb upstream 10.0kb upstream 6445 true Scaffold535: 1-6445 Capsella grandiflora
Cagra.0535s0001 10.0kb upstream 10.0kb upstream 4062 false Scaffold535: 1-4062 Capsella grandiflora
Cagra.0535s0001 10.0kb downstream 10.0kb downstream 12383 true Scaffold535: 4063-16445 Capsella grandiflora
Cagra.0535s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold535: 6446-16445 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367823 5261 Brassicaceae View MSA
123827902 5264 Brassicales-Malvales View MSA
124340215 5266 SBM View MSA
124240002 5268 Malvidae View MSA
124069129 5270 Rosid View MSA
123737441 5271 Pentapetalae View MSA
122790551 5272 Eudicot View MSA
122041571 5273 Angiosperm View MSA
121346385 5274 Embryophyte View MSA
123425231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain