Gene : Cagra.0531s0007 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  7
Name:  ? Cagra.0531s0007 Secondary Identifier:  ? PAC:28909520
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0531s0007 0.5kb upstream 0.5kb upstream 2515 true Scaffold531: 24527-27041 Capsella grandiflora
Cagra.0531s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold531: 26542-27041 Capsella grandiflora
Cagra.0531s0007 0.5kb downstream 0.5kb downstream 2515 true Scaffold531: 24027-26541 Capsella grandiflora
Cagra.0531s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold531: 24027-24526 Capsella grandiflora
Cagra.0531s0007 1.0kb upstream 1.0kb upstream 3015 true Scaffold531: 24527-27541 Capsella grandiflora
Cagra.0531s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold531: 26542-27541 Capsella grandiflora
Cagra.0531s0007 1.0kb downstream 1.0kb downstream 3015 true Scaffold531: 23527-26541 Capsella grandiflora
Cagra.0531s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold531: 23527-24526 Capsella grandiflora
Cagra.0531s0007 2.0kb upstream 2.0kb upstream 4015 true Scaffold531: 24527-28541 Capsella grandiflora
Cagra.0531s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold531: 26542-28541 Capsella grandiflora
Cagra.0531s0007 2.0kb downstream 2.0kb downstream 4015 true Scaffold531: 22527-26541 Capsella grandiflora
Cagra.0531s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold531: 22527-24526 Capsella grandiflora
Cagra.0531s0007 5.0kb upstream 5.0kb upstream 7015 true Scaffold531: 24527-31541 Capsella grandiflora
Cagra.0531s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold531: 26542-31541 Capsella grandiflora
Cagra.0531s0007 5.0kb downstream 5.0kb downstream 7015 true Scaffold531: 19527-26541 Capsella grandiflora
Cagra.0531s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold531: 19527-24526 Capsella grandiflora
Cagra.0531s0007 10.0kb upstream 10.0kb upstream 12015 true Scaffold531: 24527-36541 Capsella grandiflora
Cagra.0531s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold531: 26542-36541 Capsella grandiflora
Cagra.0531s0007 10.0kb downstream 10.0kb downstream 12015 true Scaffold531: 14527-26541 Capsella grandiflora
Cagra.0531s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold531: 14527-24526 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379485 5261 Brassicaceae View MSA
123841170 5264 Brassicales-Malvales View MSA
124322862 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain