Gene : Cagra.0483s0053 C. grandiflora v1.1
Defline:  (1 of 69) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  53
Name:  ? Cagra.0483s0053 Secondary Identifier:  ? PAC:28900453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0053 0.5kb upstream 0.5kb upstream 1073 true Scaffold483: 178316-179388 Capsella grandiflora
Cagra.0483s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 178889-179388 Capsella grandiflora
Cagra.0483s0053 0.5kb downstream 0.5kb downstream 1073 true Scaffold483: 177816-178888 Capsella grandiflora
Cagra.0483s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 177816-178315 Capsella grandiflora
Cagra.0483s0053 1.0kb upstream 1.0kb upstream 1573 true Scaffold483: 178316-179888 Capsella grandiflora
Cagra.0483s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 178889-179888 Capsella grandiflora
Cagra.0483s0053 1.0kb downstream 1.0kb downstream 1573 true Scaffold483: 177316-178888 Capsella grandiflora
Cagra.0483s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 177316-178315 Capsella grandiflora
Cagra.0483s0053 2.0kb upstream 2.0kb upstream 2573 true Scaffold483: 178316-180888 Capsella grandiflora
Cagra.0483s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 178889-180888 Capsella grandiflora
Cagra.0483s0053 2.0kb downstream 2.0kb downstream 2573 true Scaffold483: 176316-178888 Capsella grandiflora
Cagra.0483s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 176316-178315 Capsella grandiflora
Cagra.0483s0053 5.0kb upstream 5.0kb upstream 5573 true Scaffold483: 178316-183888 Capsella grandiflora
Cagra.0483s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 178889-183888 Capsella grandiflora
Cagra.0483s0053 5.0kb downstream 5.0kb downstream 5573 true Scaffold483: 173316-178888 Capsella grandiflora
Cagra.0483s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 173316-178315 Capsella grandiflora
Cagra.0483s0053 10.0kb upstream 10.0kb upstream 10573 true Scaffold483: 178316-188888 Capsella grandiflora
Cagra.0483s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 178889-188888 Capsella grandiflora
Cagra.0483s0053 10.0kb downstream 10.0kb downstream 10573 true Scaffold483: 168316-178888 Capsella grandiflora
Cagra.0483s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 168316-178315 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371362 5261 Brassicaceae View MSA
123841686 5264 Brassicales-Malvales View MSA
124347366 5266 SBM View MSA
124250911 5268 Malvidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain