Gene : Cagra.0487s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12548:SF14 - TRANSCRIPTION FACTOR-LIKE PROTEIN DPA Genomic Order:  1
Name:  ? Cagra.0487s0001 Secondary Identifier:  ? PAC:28895872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0487s0001 0.5kb upstream 0.5kb upstream 3210 true Scaffold487: 1528-4737 Capsella grandiflora
Cagra.0487s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold487: 1528-2027 Capsella grandiflora
Cagra.0487s0001 0.5kb downstream 0.5kb downstream 3210 true Scaffold487: 2028-5237 Capsella grandiflora
Cagra.0487s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold487: 4738-5237 Capsella grandiflora
Cagra.0487s0001 1.0kb upstream 1.0kb upstream 3710 true Scaffold487: 1028-4737 Capsella grandiflora
Cagra.0487s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold487: 1028-2027 Capsella grandiflora
Cagra.0487s0001 1.0kb downstream 1.0kb downstream 3710 true Scaffold487: 2028-5737 Capsella grandiflora
Cagra.0487s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold487: 4738-5737 Capsella grandiflora
Cagra.0487s0001 2.0kb upstream 2.0kb upstream 4710 true Scaffold487: 28-4737 Capsella grandiflora
Cagra.0487s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold487: 28-2027 Capsella grandiflora
Cagra.0487s0001 2.0kb downstream 2.0kb downstream 4710 true Scaffold487: 2028-6737 Capsella grandiflora
Cagra.0487s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold487: 4738-6737 Capsella grandiflora
Cagra.0487s0001 5.0kb upstream 5.0kb upstream 4737 true Scaffold487: 1-4737 Capsella grandiflora
Cagra.0487s0001 5.0kb upstream 5.0kb upstream 2027 false Scaffold487: 1-2027 Capsella grandiflora
Cagra.0487s0001 5.0kb downstream 5.0kb downstream 7710 true Scaffold487: 2028-9737 Capsella grandiflora
Cagra.0487s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold487: 4738-9737 Capsella grandiflora
Cagra.0487s0001 10.0kb upstream 10.0kb upstream 4737 true Scaffold487: 1-4737 Capsella grandiflora
Cagra.0487s0001 10.0kb upstream 10.0kb upstream 2027 false Scaffold487: 1-2027 Capsella grandiflora
Cagra.0487s0001 10.0kb downstream 10.0kb downstream 12710 true Scaffold487: 2028-14737 Capsella grandiflora
Cagra.0487s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold487: 4738-14737 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370244 5261 Brassicaceae View MSA
123839640 5264 Brassicales-Malvales View MSA
124322629 5266 SBM View MSA
124169186 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain