Gene : Cagra.0487s0002 C. grandiflora v1.1
Defline:  (1 of 34) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  2
Name:  ? Cagra.0487s0002 Secondary Identifier:  ? PAC:28895864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0487s0002 0.5kb upstream 0.5kb upstream 2239 true Scaffold487: 5559-7797 Capsella grandiflora
Cagra.0487s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold487: 5559-6058 Capsella grandiflora
Cagra.0487s0002 0.5kb downstream 0.5kb downstream 2239 true Scaffold487: 6059-8297 Capsella grandiflora
Cagra.0487s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold487: 7798-8297 Capsella grandiflora
Cagra.0487s0002 1.0kb upstream 1.0kb upstream 2739 true Scaffold487: 5059-7797 Capsella grandiflora
Cagra.0487s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold487: 5059-6058 Capsella grandiflora
Cagra.0487s0002 1.0kb downstream 1.0kb downstream 2739 true Scaffold487: 6059-8797 Capsella grandiflora
Cagra.0487s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold487: 7798-8797 Capsella grandiflora
Cagra.0487s0002 2.0kb upstream 2.0kb upstream 3739 true Scaffold487: 4059-7797 Capsella grandiflora
Cagra.0487s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold487: 4059-6058 Capsella grandiflora
Cagra.0487s0002 2.0kb downstream 2.0kb downstream 3739 true Scaffold487: 6059-9797 Capsella grandiflora
Cagra.0487s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold487: 7798-9797 Capsella grandiflora
Cagra.0487s0002 5.0kb upstream 5.0kb upstream 6739 true Scaffold487: 1059-7797 Capsella grandiflora
Cagra.0487s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold487: 1059-6058 Capsella grandiflora
Cagra.0487s0002 5.0kb downstream 5.0kb downstream 6739 true Scaffold487: 6059-12797 Capsella grandiflora
Cagra.0487s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold487: 7798-12797 Capsella grandiflora
Cagra.0487s0002 10.0kb upstream 10.0kb upstream 7797 true Scaffold487: 1-7797 Capsella grandiflora
Cagra.0487s0002 10.0kb upstream 10.0kb upstream 6058 false Scaffold487: 1-6058 Capsella grandiflora
Cagra.0487s0002 10.0kb downstream 10.0kb downstream 11739 true Scaffold487: 6059-17797 Capsella grandiflora
Cagra.0487s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold487: 7798-17797 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376100 5261 Brassicaceae View MSA
123834997 5264 Brassicales-Malvales View MSA
124344647 5266 SBM View MSA
124248086 5268 Malvidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain