Gene : Cagra.0487s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12847:SF5 - CCR4-ASSOCIATED FACTOR 16 Genomic Order:  16
Name:  ? Cagra.0487s0016 Secondary Identifier:  ? PAC:28895878
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0487s0016 0.5kb upstream 0.5kb upstream 2457 true Scaffold487: 69327-71783 Capsella grandiflora
Cagra.0487s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold487: 69327-69826 Capsella grandiflora
Cagra.0487s0016 0.5kb downstream 0.5kb downstream 2457 true Scaffold487: 69827-72283 Capsella grandiflora
Cagra.0487s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold487: 71784-72283 Capsella grandiflora
Cagra.0487s0016 1.0kb upstream 1.0kb upstream 2957 true Scaffold487: 68827-71783 Capsella grandiflora
Cagra.0487s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold487: 68827-69826 Capsella grandiflora
Cagra.0487s0016 1.0kb downstream 1.0kb downstream 2957 true Scaffold487: 69827-72783 Capsella grandiflora
Cagra.0487s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold487: 71784-72783 Capsella grandiflora
Cagra.0487s0016 2.0kb upstream 2.0kb upstream 3957 true Scaffold487: 67827-71783 Capsella grandiflora
Cagra.0487s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold487: 67827-69826 Capsella grandiflora
Cagra.0487s0016 2.0kb downstream 2.0kb downstream 3957 true Scaffold487: 69827-73783 Capsella grandiflora
Cagra.0487s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold487: 71784-73783 Capsella grandiflora
Cagra.0487s0016 5.0kb upstream 5.0kb upstream 6957 true Scaffold487: 64827-71783 Capsella grandiflora
Cagra.0487s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold487: 64827-69826 Capsella grandiflora
Cagra.0487s0016 5.0kb downstream 5.0kb downstream 6957 true Scaffold487: 69827-76783 Capsella grandiflora
Cagra.0487s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold487: 71784-76783 Capsella grandiflora
Cagra.0487s0016 10.0kb upstream 10.0kb upstream 11957 true Scaffold487: 59827-71783 Capsella grandiflora
Cagra.0487s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold487: 59827-69826 Capsella grandiflora
Cagra.0487s0016 10.0kb downstream 10.0kb downstream 11957 true Scaffold487: 69827-81783 Capsella grandiflora
Cagra.0487s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold487: 71784-81783 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371489 5261 Brassicaceae View MSA
123834389 5264 Brassicales-Malvales View MSA
124345617 5266 SBM View MSA
124239148 5268 Malvidae View MSA
124068469 5270 Rosid View MSA
123751800 5271 Pentapetalae View MSA
122788747 5272 Eudicot View MSA
122046075 5273 Angiosperm View MSA
121344435 5274 Embryophyte View MSA
123425929 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain