Gene : Cagra.0495s0006 C. grandiflora v1.1
Defline:  (1 of 1) KOG4452 - Predicted membrane protein Genomic Order:  6
Name:  ? Cagra.0495s0006 Secondary Identifier:  ? PAC:28897131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0495s0006 0.5kb upstream 0.5kb upstream 2103 true Scaffold495: 18080-20182 Capsella grandiflora
Cagra.0495s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold495: 18080-18579 Capsella grandiflora
Cagra.0495s0006 0.5kb downstream 0.5kb downstream 2103 true Scaffold495: 18580-20682 Capsella grandiflora
Cagra.0495s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold495: 20183-20682 Capsella grandiflora
Cagra.0495s0006 1.0kb upstream 1.0kb upstream 2603 true Scaffold495: 17580-20182 Capsella grandiflora
Cagra.0495s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold495: 17580-18579 Capsella grandiflora
Cagra.0495s0006 1.0kb downstream 1.0kb downstream 2603 true Scaffold495: 18580-21182 Capsella grandiflora
Cagra.0495s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold495: 20183-21182 Capsella grandiflora
Cagra.0495s0006 2.0kb upstream 2.0kb upstream 3603 true Scaffold495: 16580-20182 Capsella grandiflora
Cagra.0495s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold495: 16580-18579 Capsella grandiflora
Cagra.0495s0006 2.0kb downstream 2.0kb downstream 3603 true Scaffold495: 18580-22182 Capsella grandiflora
Cagra.0495s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold495: 20183-22182 Capsella grandiflora
Cagra.0495s0006 5.0kb upstream 5.0kb upstream 6603 true Scaffold495: 13580-20182 Capsella grandiflora
Cagra.0495s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold495: 13580-18579 Capsella grandiflora
Cagra.0495s0006 5.0kb downstream 5.0kb downstream 6603 true Scaffold495: 18580-25182 Capsella grandiflora
Cagra.0495s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold495: 20183-25182 Capsella grandiflora
Cagra.0495s0006 10.0kb upstream 10.0kb upstream 11603 true Scaffold495: 8580-20182 Capsella grandiflora
Cagra.0495s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold495: 8580-18579 Capsella grandiflora
Cagra.0495s0006 10.0kb downstream 10.0kb downstream 11603 true Scaffold495: 18580-30182 Capsella grandiflora
Cagra.0495s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold495: 20183-30182 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361798 5261 Brassicaceae View MSA
123836902 5264 Brassicales-Malvales View MSA
124338862 5266 SBM View MSA
124250596 5268 Malvidae View MSA
124072818 5270 Rosid View MSA
123745362 5271 Pentapetalae View MSA
122797533 5272 Eudicot View MSA
122042429 5273 Angiosperm View MSA
121343951 5274 Embryophyte View MSA
123425665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain