Gene : Cagra.0645s0035 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11215 - METAL DEPENDENT HYDROLASE - RELATED Genomic Order:  35
Name:  ? Cagra.0645s0035 Secondary Identifier:  ? PAC:28896891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0645s0035 0.5kb upstream 0.5kb upstream 2972 true Scaffold645: 146850-149821 Capsella grandiflora
Cagra.0645s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold645: 149322-149821 Capsella grandiflora
Cagra.0645s0035 0.5kb downstream 0.5kb downstream 2972 true Scaffold645: 146350-149321 Capsella grandiflora
Cagra.0645s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold645: 146350-146849 Capsella grandiflora
Cagra.0645s0035 1.0kb upstream 1.0kb upstream 3472 true Scaffold645: 146850-150321 Capsella grandiflora
Cagra.0645s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold645: 149322-150321 Capsella grandiflora
Cagra.0645s0035 1.0kb downstream 1.0kb downstream 3472 true Scaffold645: 145850-149321 Capsella grandiflora
Cagra.0645s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold645: 145850-146849 Capsella grandiflora
Cagra.0645s0035 2.0kb upstream 2.0kb upstream 4472 true Scaffold645: 146850-151321 Capsella grandiflora
Cagra.0645s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold645: 149322-151321 Capsella grandiflora
Cagra.0645s0035 2.0kb downstream 2.0kb downstream 4472 true Scaffold645: 144850-149321 Capsella grandiflora
Cagra.0645s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold645: 144850-146849 Capsella grandiflora
Cagra.0645s0035 5.0kb upstream 5.0kb upstream 7018 true Scaffold645: 146850-153867 Capsella grandiflora
Cagra.0645s0035 5.0kb upstream 5.0kb upstream 4546 false Scaffold645: 149322-153867 Capsella grandiflora
Cagra.0645s0035 5.0kb downstream 5.0kb downstream 7472 true Scaffold645: 141850-149321 Capsella grandiflora
Cagra.0645s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold645: 141850-146849 Capsella grandiflora
Cagra.0645s0035 10.0kb upstream 10.0kb upstream 7018 true Scaffold645: 146850-153867 Capsella grandiflora
Cagra.0645s0035 10.0kb upstream 10.0kb upstream 4546 false Scaffold645: 149322-153867 Capsella grandiflora
Cagra.0645s0035 10.0kb downstream 10.0kb downstream 12472 true Scaffold645: 136850-149321 Capsella grandiflora
Cagra.0645s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold645: 136850-146849 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361802 5261 Brassicaceae View MSA
123829417 5264 Brassicales-Malvales View MSA
124321594 5266 SBM View MSA
124240154 5268 Malvidae View MSA
124060891 5270 Rosid View MSA
123741833 5271 Pentapetalae View MSA
122789735 5272 Eudicot View MSA
122041582 5273 Angiosperm View MSA
121346472 5274 Embryophyte View MSA
123423927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain