Gene : Cagra.0650s0009 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11972:SF64 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN A-RELATED Genomic Order:  9
Name:  ? Cagra.0650s0009 Secondary Identifier:  ? PAC:28920244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0650s0009 0.5kb upstream 0.5kb upstream 5173 true Scaffold650: 22374-27546 Capsella grandiflora
Cagra.0650s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold650: 27047-27546 Capsella grandiflora
Cagra.0650s0009 0.5kb downstream 0.5kb downstream 5173 true Scaffold650: 21874-27046 Capsella grandiflora
Cagra.0650s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold650: 21874-22373 Capsella grandiflora
Cagra.0650s0009 1.0kb upstream 1.0kb upstream 5673 true Scaffold650: 22374-28046 Capsella grandiflora
Cagra.0650s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold650: 27047-28046 Capsella grandiflora
Cagra.0650s0009 1.0kb downstream 1.0kb downstream 5673 true Scaffold650: 21374-27046 Capsella grandiflora
Cagra.0650s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold650: 21374-22373 Capsella grandiflora
Cagra.0650s0009 2.0kb upstream 2.0kb upstream 6673 true Scaffold650: 22374-29046 Capsella grandiflora
Cagra.0650s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold650: 27047-29046 Capsella grandiflora
Cagra.0650s0009 2.0kb downstream 2.0kb downstream 6673 true Scaffold650: 20374-27046 Capsella grandiflora
Cagra.0650s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold650: 20374-22373 Capsella grandiflora
Cagra.0650s0009 5.0kb upstream 5.0kb upstream 9673 true Scaffold650: 22374-32046 Capsella grandiflora
Cagra.0650s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold650: 27047-32046 Capsella grandiflora
Cagra.0650s0009 5.0kb downstream 5.0kb downstream 9673 true Scaffold650: 17374-27046 Capsella grandiflora
Cagra.0650s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold650: 17374-22373 Capsella grandiflora
Cagra.0650s0009 10.0kb upstream 10.0kb upstream 14022 true Scaffold650: 22374-36395 Capsella grandiflora
Cagra.0650s0009 10.0kb upstream 10.0kb upstream 9349 false Scaffold650: 27047-36395 Capsella grandiflora
Cagra.0650s0009 10.0kb downstream 10.0kb downstream 14673 true Scaffold650: 12374-27046 Capsella grandiflora
Cagra.0650s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold650: 12374-22373 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371703 5261 Brassicaceae View MSA
123839520 5264 Brassicales-Malvales View MSA
124346029 5266 SBM View MSA
124242458 5268 Malvidae View MSA
124063866 5270 Rosid View MSA
123751204 5271 Pentapetalae View MSA
122794480 5272 Eudicot View MSA
122044435 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain