Gene : Cagra.0664s0006 C. grandiflora v1.1
Defline:  (1 of 29) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  6
Name:  ? Cagra.0664s0006 Secondary Identifier:  ? PAC:28911756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0006 0.5kb upstream 0.5kb upstream 1548 true Scaffold664: 18870-20417 Capsella grandiflora
Cagra.0664s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 18870-19369 Capsella grandiflora
Cagra.0664s0006 0.5kb downstream 0.5kb downstream 1548 true Scaffold664: 19370-20917 Capsella grandiflora
Cagra.0664s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 20418-20917 Capsella grandiflora
Cagra.0664s0006 1.0kb upstream 1.0kb upstream 2048 true Scaffold664: 18370-20417 Capsella grandiflora
Cagra.0664s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 18370-19369 Capsella grandiflora
Cagra.0664s0006 1.0kb downstream 1.0kb downstream 2048 true Scaffold664: 19370-21417 Capsella grandiflora
Cagra.0664s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 20418-21417 Capsella grandiflora
Cagra.0664s0006 2.0kb upstream 2.0kb upstream 3048 true Scaffold664: 17370-20417 Capsella grandiflora
Cagra.0664s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 17370-19369 Capsella grandiflora
Cagra.0664s0006 2.0kb downstream 2.0kb downstream 3048 true Scaffold664: 19370-22417 Capsella grandiflora
Cagra.0664s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 20418-22417 Capsella grandiflora
Cagra.0664s0006 5.0kb upstream 5.0kb upstream 6048 true Scaffold664: 14370-20417 Capsella grandiflora
Cagra.0664s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 14370-19369 Capsella grandiflora
Cagra.0664s0006 5.0kb downstream 5.0kb downstream 6048 true Scaffold664: 19370-25417 Capsella grandiflora
Cagra.0664s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 20418-25417 Capsella grandiflora
Cagra.0664s0006 10.0kb upstream 10.0kb upstream 11048 true Scaffold664: 9370-20417 Capsella grandiflora
Cagra.0664s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 9370-19369 Capsella grandiflora
Cagra.0664s0006 10.0kb downstream 10.0kb downstream 11048 true Scaffold664: 19370-30417 Capsella grandiflora
Cagra.0664s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 20418-30417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377113 5261 Brassicaceae View MSA
123839487 5264 Brassicales-Malvales View MSA
124322614 5266 SBM View MSA
124254675 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain