Gene : Cagra.0664s0043 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  43
Name:  ? Cagra.0664s0043 Secondary Identifier:  ? PAC:28911770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0043 0.5kb upstream 0.5kb upstream 8392 true Scaffold664: 133566-141957 Capsella grandiflora
Cagra.0664s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 133566-134065 Capsella grandiflora
Cagra.0664s0043 0.5kb downstream 0.5kb downstream 8392 true Scaffold664: 134066-142457 Capsella grandiflora
Cagra.0664s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 141958-142457 Capsella grandiflora
Cagra.0664s0043 1.0kb upstream 1.0kb upstream 8892 true Scaffold664: 133066-141957 Capsella grandiflora
Cagra.0664s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 133066-134065 Capsella grandiflora
Cagra.0664s0043 1.0kb downstream 1.0kb downstream 8892 true Scaffold664: 134066-142957 Capsella grandiflora
Cagra.0664s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 141958-142957 Capsella grandiflora
Cagra.0664s0043 2.0kb upstream 2.0kb upstream 9892 true Scaffold664: 132066-141957 Capsella grandiflora
Cagra.0664s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 132066-134065 Capsella grandiflora
Cagra.0664s0043 2.0kb downstream 2.0kb downstream 9892 true Scaffold664: 134066-143957 Capsella grandiflora
Cagra.0664s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 141958-143957 Capsella grandiflora
Cagra.0664s0043 5.0kb upstream 5.0kb upstream 12892 true Scaffold664: 129066-141957 Capsella grandiflora
Cagra.0664s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 129066-134065 Capsella grandiflora
Cagra.0664s0043 5.0kb downstream 5.0kb downstream 12892 true Scaffold664: 134066-146957 Capsella grandiflora
Cagra.0664s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 141958-146957 Capsella grandiflora
Cagra.0664s0043 10.0kb upstream 10.0kb upstream 17892 true Scaffold664: 124066-141957 Capsella grandiflora
Cagra.0664s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 124066-134065 Capsella grandiflora
Cagra.0664s0043 10.0kb downstream 10.0kb downstream 17892 true Scaffold664: 134066-151957 Capsella grandiflora
Cagra.0664s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 141958-151957 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370083 5261 Brassicaceae View MSA
123839388 5264 Brassicales-Malvales View MSA
124337608 5266 SBM View MSA
124240604 5268 Malvidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain