Gene : Cagra.0635s0032 C. grandiflora v1.1
Defline:  (1 of 11) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  32
Name:  ? Cagra.0635s0032 Secondary Identifier:  ? PAC:28908345
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5936 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0635s0032 0.5kb upstream 0.5kb upstream 2797 true Scaffold635: 123427-126223 Capsella grandiflora
Cagra.0635s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold635: 125724-126223 Capsella grandiflora
Cagra.0635s0032 0.5kb downstream 0.5kb downstream 2797 true Scaffold635: 122927-125723 Capsella grandiflora
Cagra.0635s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold635: 122927-123426 Capsella grandiflora
Cagra.0635s0032 1.0kb upstream 1.0kb upstream 3297 true Scaffold635: 123427-126723 Capsella grandiflora
Cagra.0635s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold635: 125724-126723 Capsella grandiflora
Cagra.0635s0032 1.0kb downstream 1.0kb downstream 3297 true Scaffold635: 122427-125723 Capsella grandiflora
Cagra.0635s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold635: 122427-123426 Capsella grandiflora
Cagra.0635s0032 2.0kb upstream 2.0kb upstream 4297 true Scaffold635: 123427-127723 Capsella grandiflora
Cagra.0635s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold635: 125724-127723 Capsella grandiflora
Cagra.0635s0032 2.0kb downstream 2.0kb downstream 4297 true Scaffold635: 121427-125723 Capsella grandiflora
Cagra.0635s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold635: 121427-123426 Capsella grandiflora
Cagra.0635s0032 5.0kb upstream 5.0kb upstream 7297 true Scaffold635: 123427-130723 Capsella grandiflora
Cagra.0635s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold635: 125724-130723 Capsella grandiflora
Cagra.0635s0032 5.0kb downstream 5.0kb downstream 7297 true Scaffold635: 118427-125723 Capsella grandiflora
Cagra.0635s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold635: 118427-123426 Capsella grandiflora
Cagra.0635s0032 10.0kb upstream 10.0kb upstream 12297 true Scaffold635: 123427-135723 Capsella grandiflora
Cagra.0635s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold635: 125724-135723 Capsella grandiflora
Cagra.0635s0032 10.0kb downstream 10.0kb downstream 12297 true Scaffold635: 113427-125723 Capsella grandiflora
Cagra.0635s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold635: 113427-123426 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378402 5261 Brassicaceae View MSA
123833472 5264 Brassicales-Malvales View MSA
124339455 5266 SBM View MSA
124245005 5268 Malvidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain