Gene : Cagra.0643s0002 C. grandiflora v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  2
Name:  ? Cagra.0643s0002 Secondary Identifier:  ? PAC:28899280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0643s0002 0.5kb upstream 0.5kb upstream 2942 true Scaffold643: 8351-11292 Capsella grandiflora
Cagra.0643s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold643: 8351-8850 Capsella grandiflora
Cagra.0643s0002 0.5kb downstream 0.5kb downstream 2942 true Scaffold643: 8851-11792 Capsella grandiflora
Cagra.0643s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold643: 11293-11792 Capsella grandiflora
Cagra.0643s0002 1.0kb upstream 1.0kb upstream 3442 true Scaffold643: 7851-11292 Capsella grandiflora
Cagra.0643s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold643: 7851-8850 Capsella grandiflora
Cagra.0643s0002 1.0kb downstream 1.0kb downstream 3442 true Scaffold643: 8851-12292 Capsella grandiflora
Cagra.0643s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold643: 11293-12292 Capsella grandiflora
Cagra.0643s0002 2.0kb upstream 2.0kb upstream 4442 true Scaffold643: 6851-11292 Capsella grandiflora
Cagra.0643s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold643: 6851-8850 Capsella grandiflora
Cagra.0643s0002 2.0kb downstream 2.0kb downstream 4442 true Scaffold643: 8851-13292 Capsella grandiflora
Cagra.0643s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold643: 11293-13292 Capsella grandiflora
Cagra.0643s0002 5.0kb upstream 5.0kb upstream 7442 true Scaffold643: 3851-11292 Capsella grandiflora
Cagra.0643s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold643: 3851-8850 Capsella grandiflora
Cagra.0643s0002 5.0kb downstream 5.0kb downstream 7442 true Scaffold643: 8851-16292 Capsella grandiflora
Cagra.0643s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold643: 11293-16292 Capsella grandiflora
Cagra.0643s0002 10.0kb upstream 10.0kb upstream 11292 true Scaffold643: 1-11292 Capsella grandiflora
Cagra.0643s0002 10.0kb upstream 10.0kb upstream 8850 false Scaffold643: 1-8850 Capsella grandiflora
Cagra.0643s0002 10.0kb downstream 10.0kb downstream 8363 true Scaffold643: 8851-17213 Capsella grandiflora
Cagra.0643s0002 10.0kb downstream 10.0kb downstream 5921 false Scaffold643: 11293-17213 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511283 5273 Angiosperm View MSA
122374704 5261 Brassicaceae View MSA
123800808 5264 Brassicales-Malvales View MSA
124298176 5266 SBM View MSA
124149886 5268 Malvidae View MSA
123875606 5270 Rosid View MSA
123459400 5271 Pentapetalae View MSA
122494791 5272 Eudicot View MSA
120784335 5274 Embryophyte View MSA
122826262 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain