Gene : Cagra.0639s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31355:SF5 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.0639s0001 Secondary Identifier:  ? PAC:28902517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0639s0001 0.5kb upstream 0.5kb upstream 3657 true Scaffold639: 9248-12904 Capsella grandiflora
Cagra.0639s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold639: 9248-9747 Capsella grandiflora
Cagra.0639s0001 0.5kb downstream 0.5kb downstream 3657 true Scaffold639: 9748-13404 Capsella grandiflora
Cagra.0639s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold639: 12905-13404 Capsella grandiflora
Cagra.0639s0001 1.0kb upstream 1.0kb upstream 4157 true Scaffold639: 8748-12904 Capsella grandiflora
Cagra.0639s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold639: 8748-9747 Capsella grandiflora
Cagra.0639s0001 1.0kb downstream 1.0kb downstream 4157 true Scaffold639: 9748-13904 Capsella grandiflora
Cagra.0639s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold639: 12905-13904 Capsella grandiflora
Cagra.0639s0001 2.0kb upstream 2.0kb upstream 5157 true Scaffold639: 7748-12904 Capsella grandiflora
Cagra.0639s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold639: 7748-9747 Capsella grandiflora
Cagra.0639s0001 2.0kb downstream 2.0kb downstream 5157 true Scaffold639: 9748-14904 Capsella grandiflora
Cagra.0639s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold639: 12905-14904 Capsella grandiflora
Cagra.0639s0001 5.0kb upstream 5.0kb upstream 8157 true Scaffold639: 4748-12904 Capsella grandiflora
Cagra.0639s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold639: 4748-9747 Capsella grandiflora
Cagra.0639s0001 5.0kb downstream 5.0kb downstream 6345 true Scaffold639: 9748-16092 Capsella grandiflora
Cagra.0639s0001 5.0kb downstream 5.0kb downstream 3188 false Scaffold639: 12905-16092 Capsella grandiflora
Cagra.0639s0001 10.0kb upstream 10.0kb upstream 12904 true Scaffold639: 1-12904 Capsella grandiflora
Cagra.0639s0001 10.0kb upstream 10.0kb upstream 9747 false Scaffold639: 1-9747 Capsella grandiflora
Cagra.0639s0001 10.0kb downstream 10.0kb downstream 6345 true Scaffold639: 9748-16092 Capsella grandiflora
Cagra.0639s0001 10.0kb downstream 10.0kb downstream 3188 false Scaffold639: 12905-16092 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367778 5261 Brassicaceae View MSA
123832024 5264 Brassicales-Malvales View MSA
124339958 5266 SBM View MSA
124240272 5268 Malvidae View MSA
124068750 5270 Rosid View MSA
123737726 5271 Pentapetalae View MSA
122786179 5272 Eudicot View MSA
122044340 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain