Gene : Cagra.0645s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  4
Name:  ? Cagra.0645s0004 Secondary Identifier:  ? PAC:28896901
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0645s0004 0.5kb upstream 0.5kb upstream 2287 true Scaffold645: 12081-14367 Capsella grandiflora
Cagra.0645s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold645: 13868-14367 Capsella grandiflora
Cagra.0645s0004 0.5kb downstream 0.5kb downstream 2287 true Scaffold645: 11581-13867 Capsella grandiflora
Cagra.0645s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold645: 11581-12080 Capsella grandiflora
Cagra.0645s0004 1.0kb upstream 1.0kb upstream 2787 true Scaffold645: 12081-14867 Capsella grandiflora
Cagra.0645s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold645: 13868-14867 Capsella grandiflora
Cagra.0645s0004 1.0kb downstream 1.0kb downstream 2787 true Scaffold645: 11081-13867 Capsella grandiflora
Cagra.0645s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold645: 11081-12080 Capsella grandiflora
Cagra.0645s0004 2.0kb upstream 2.0kb upstream 3787 true Scaffold645: 12081-15867 Capsella grandiflora
Cagra.0645s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold645: 13868-15867 Capsella grandiflora
Cagra.0645s0004 2.0kb downstream 2.0kb downstream 3787 true Scaffold645: 10081-13867 Capsella grandiflora
Cagra.0645s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold645: 10081-12080 Capsella grandiflora
Cagra.0645s0004 5.0kb upstream 5.0kb upstream 6787 true Scaffold645: 12081-18867 Capsella grandiflora
Cagra.0645s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold645: 13868-18867 Capsella grandiflora
Cagra.0645s0004 5.0kb downstream 5.0kb downstream 6787 true Scaffold645: 7081-13867 Capsella grandiflora
Cagra.0645s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold645: 7081-12080 Capsella grandiflora
Cagra.0645s0004 10.0kb upstream 10.0kb upstream 11787 true Scaffold645: 12081-23867 Capsella grandiflora
Cagra.0645s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold645: 13868-23867 Capsella grandiflora
Cagra.0645s0004 10.0kb downstream 10.0kb downstream 11787 true Scaffold645: 2081-13867 Capsella grandiflora
Cagra.0645s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold645: 2081-12080 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365525 5261 Brassicaceae View MSA
123840578 5264 Brassicales-Malvales View MSA
124348596 5266 SBM View MSA
124242702 5268 Malvidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain