Gene : Cagra.0612s0109 C. grandiflora v1.1
Defline:  (1 of 39) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  109
Name:  ? Cagra.0612s0109 Secondary Identifier:  ? PAC:28917589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0109 0.5kb upstream 0.5kb upstream 1563 true Scaffold612: 386718-388280 Capsella grandiflora
Cagra.0612s0109 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 387781-388280 Capsella grandiflora
Cagra.0612s0109 0.5kb downstream 0.5kb downstream 1563 true Scaffold612: 386218-387780 Capsella grandiflora
Cagra.0612s0109 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 386218-386717 Capsella grandiflora
Cagra.0612s0109 1.0kb upstream 1.0kb upstream 2063 true Scaffold612: 386718-388780 Capsella grandiflora
Cagra.0612s0109 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 387781-388780 Capsella grandiflora
Cagra.0612s0109 1.0kb downstream 1.0kb downstream 2063 true Scaffold612: 385718-387780 Capsella grandiflora
Cagra.0612s0109 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 385718-386717 Capsella grandiflora
Cagra.0612s0109 2.0kb upstream 2.0kb upstream 3063 true Scaffold612: 386718-389780 Capsella grandiflora
Cagra.0612s0109 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 387781-389780 Capsella grandiflora
Cagra.0612s0109 2.0kb downstream 2.0kb downstream 3063 true Scaffold612: 384718-387780 Capsella grandiflora
Cagra.0612s0109 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 384718-386717 Capsella grandiflora
Cagra.0612s0109 5.0kb upstream 5.0kb upstream 3404 true Scaffold612: 386718-390121 Capsella grandiflora
Cagra.0612s0109 5.0kb upstream 5.0kb upstream 2341 false Scaffold612: 387781-390121 Capsella grandiflora
Cagra.0612s0109 5.0kb downstream 5.0kb downstream 6063 true Scaffold612: 381718-387780 Capsella grandiflora
Cagra.0612s0109 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 381718-386717 Capsella grandiflora
Cagra.0612s0109 10.0kb upstream 10.0kb upstream 3404 true Scaffold612: 386718-390121 Capsella grandiflora
Cagra.0612s0109 10.0kb upstream 10.0kb upstream 2341 false Scaffold612: 387781-390121 Capsella grandiflora
Cagra.0612s0109 10.0kb downstream 10.0kb downstream 11063 true Scaffold612: 376718-387780 Capsella grandiflora
Cagra.0612s0109 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 376718-386717 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378528 5261 Brassicaceae View MSA
123839256 5264 Brassicales-Malvales View MSA
124343418 5266 SBM View MSA
124248558 5268 Malvidae View MSA
124063057 5270 Rosid View MSA
123740553 5271 Pentapetalae View MSA
122796755 5272 Eudicot View MSA
122043867 5273 Angiosperm View MSA
121310202 5274 Embryophyte View MSA
123347759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain