Gene : Cagra.0612s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF3 - NTKL-BINDING PROTEIN 1 Genomic Order:  9
Name:  ? Cagra.0612s0009 Secondary Identifier:  ? PAC:28917603
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0009 0.5kb upstream 0.5kb upstream 1596 true Scaffold612: 43264-44859 Capsella grandiflora
Cagra.0612s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 43264-43763 Capsella grandiflora
Cagra.0612s0009 0.5kb downstream 0.5kb downstream 1596 true Scaffold612: 43764-45359 Capsella grandiflora
Cagra.0612s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 44860-45359 Capsella grandiflora
Cagra.0612s0009 1.0kb upstream 1.0kb upstream 2096 true Scaffold612: 42764-44859 Capsella grandiflora
Cagra.0612s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 42764-43763 Capsella grandiflora
Cagra.0612s0009 1.0kb downstream 1.0kb downstream 2096 true Scaffold612: 43764-45859 Capsella grandiflora
Cagra.0612s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 44860-45859 Capsella grandiflora
Cagra.0612s0009 2.0kb upstream 2.0kb upstream 3096 true Scaffold612: 41764-44859 Capsella grandiflora
Cagra.0612s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 41764-43763 Capsella grandiflora
Cagra.0612s0009 2.0kb downstream 2.0kb downstream 3096 true Scaffold612: 43764-46859 Capsella grandiflora
Cagra.0612s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 44860-46859 Capsella grandiflora
Cagra.0612s0009 5.0kb upstream 5.0kb upstream 6096 true Scaffold612: 38764-44859 Capsella grandiflora
Cagra.0612s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 38764-43763 Capsella grandiflora
Cagra.0612s0009 5.0kb downstream 5.0kb downstream 6096 true Scaffold612: 43764-49859 Capsella grandiflora
Cagra.0612s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 44860-49859 Capsella grandiflora
Cagra.0612s0009 10.0kb upstream 10.0kb upstream 11096 true Scaffold612: 33764-44859 Capsella grandiflora
Cagra.0612s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 33764-43763 Capsella grandiflora
Cagra.0612s0009 10.0kb downstream 10.0kb downstream 11096 true Scaffold612: 43764-54859 Capsella grandiflora
Cagra.0612s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 44860-54859 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376001 5261 Brassicaceae View MSA
123801112 5264 Brassicales-Malvales View MSA
124298449 5266 SBM View MSA
124245895 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain