Gene : Cagra.0612s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33317:SF1 - POLYNUCLEOTIDYL TRANSFERASE/ RIBONUCLEASE H-LIKE PROTEIN Genomic Order:  10
Name:  ? Cagra.0612s0010 Secondary Identifier:  ? PAC:28917585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0010 0.5kb upstream 0.5kb upstream 2420 true Scaffold612: 44429-46848 Capsella grandiflora
Cagra.0612s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 46349-46848 Capsella grandiflora
Cagra.0612s0010 0.5kb downstream 0.5kb downstream 2420 true Scaffold612: 43929-46348 Capsella grandiflora
Cagra.0612s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 43929-44428 Capsella grandiflora
Cagra.0612s0010 1.0kb upstream 1.0kb upstream 2920 true Scaffold612: 44429-47348 Capsella grandiflora
Cagra.0612s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 46349-47348 Capsella grandiflora
Cagra.0612s0010 1.0kb downstream 1.0kb downstream 2920 true Scaffold612: 43429-46348 Capsella grandiflora
Cagra.0612s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 43429-44428 Capsella grandiflora
Cagra.0612s0010 2.0kb upstream 2.0kb upstream 3920 true Scaffold612: 44429-48348 Capsella grandiflora
Cagra.0612s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 46349-48348 Capsella grandiflora
Cagra.0612s0010 2.0kb downstream 2.0kb downstream 3920 true Scaffold612: 42429-46348 Capsella grandiflora
Cagra.0612s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 42429-44428 Capsella grandiflora
Cagra.0612s0010 5.0kb upstream 5.0kb upstream 6920 true Scaffold612: 44429-51348 Capsella grandiflora
Cagra.0612s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 46349-51348 Capsella grandiflora
Cagra.0612s0010 5.0kb downstream 5.0kb downstream 6920 true Scaffold612: 39429-46348 Capsella grandiflora
Cagra.0612s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 39429-44428 Capsella grandiflora
Cagra.0612s0010 10.0kb upstream 10.0kb upstream 11920 true Scaffold612: 44429-56348 Capsella grandiflora
Cagra.0612s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 46349-56348 Capsella grandiflora
Cagra.0612s0010 10.0kb downstream 10.0kb downstream 11920 true Scaffold612: 34429-46348 Capsella grandiflora
Cagra.0612s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 34429-44428 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361081 5261 Brassicaceae View MSA
123830675 5264 Brassicales-Malvales View MSA
124342824 5266 SBM View MSA
124240635 5268 Malvidae View MSA
124067279 5270 Rosid View MSA
123746369 5271 Pentapetalae View MSA
122785614 5272 Eudicot View MSA
122048036 5273 Angiosperm View MSA
121349861 5274 Embryophyte View MSA
123381473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain