Gene : Cagra.0605s0065 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  65
Name:  ? Cagra.0605s0065 Secondary Identifier:  ? PAC:28917871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0065 0.5kb upstream 0.5kb upstream 5388 true Scaffold605: 193035-198422 Capsella grandiflora
Cagra.0605s0065 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 197923-198422 Capsella grandiflora
Cagra.0605s0065 0.5kb downstream 0.5kb downstream 5388 true Scaffold605: 192535-197922 Capsella grandiflora
Cagra.0605s0065 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 192535-193034 Capsella grandiflora
Cagra.0605s0065 1.0kb upstream 1.0kb upstream 5888 true Scaffold605: 193035-198922 Capsella grandiflora
Cagra.0605s0065 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 197923-198922 Capsella grandiflora
Cagra.0605s0065 1.0kb downstream 1.0kb downstream 5888 true Scaffold605: 192035-197922 Capsella grandiflora
Cagra.0605s0065 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 192035-193034 Capsella grandiflora
Cagra.0605s0065 2.0kb upstream 2.0kb upstream 6888 true Scaffold605: 193035-199922 Capsella grandiflora
Cagra.0605s0065 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 197923-199922 Capsella grandiflora
Cagra.0605s0065 2.0kb downstream 2.0kb downstream 6888 true Scaffold605: 191035-197922 Capsella grandiflora
Cagra.0605s0065 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 191035-193034 Capsella grandiflora
Cagra.0605s0065 5.0kb upstream 5.0kb upstream 9888 true Scaffold605: 193035-202922 Capsella grandiflora
Cagra.0605s0065 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 197923-202922 Capsella grandiflora
Cagra.0605s0065 5.0kb downstream 5.0kb downstream 9888 true Scaffold605: 188035-197922 Capsella grandiflora
Cagra.0605s0065 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 188035-193034 Capsella grandiflora
Cagra.0605s0065 10.0kb upstream 10.0kb upstream 14888 true Scaffold605: 193035-207922 Capsella grandiflora
Cagra.0605s0065 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 197923-207922 Capsella grandiflora
Cagra.0605s0065 10.0kb downstream 10.0kb downstream 14888 true Scaffold605: 183035-197922 Capsella grandiflora
Cagra.0605s0065 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 183035-193034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379583 5261 Brassicaceae View MSA
123838610 5264 Brassicales-Malvales View MSA
124347756 5266 SBM View MSA
124245641 5268 Malvidae View MSA
124069340 5270 Rosid View MSA
123627867 5271 Pentapetalae View MSA
122795496 5272 Eudicot View MSA
122048202 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain