Gene : Cagra.0594s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  14
Name:  ? Cagra.0594s0014 Secondary Identifier:  ? PAC:28901660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0594s0014 0.5kb upstream 0.5kb upstream 4964 true Scaffold594: 56030-60993 Capsella grandiflora
Cagra.0594s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold594: 56030-56529 Capsella grandiflora
Cagra.0594s0014 0.5kb downstream 0.5kb downstream 4964 true Scaffold594: 56530-61493 Capsella grandiflora
Cagra.0594s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold594: 60994-61493 Capsella grandiflora
Cagra.0594s0014 1.0kb upstream 1.0kb upstream 5464 true Scaffold594: 55530-60993 Capsella grandiflora
Cagra.0594s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold594: 55530-56529 Capsella grandiflora
Cagra.0594s0014 1.0kb downstream 1.0kb downstream 5007 true Scaffold594: 56530-61536 Capsella grandiflora
Cagra.0594s0014 1.0kb downstream 1.0kb downstream 543 false Scaffold594: 60994-61536 Capsella grandiflora
Cagra.0594s0014 2.0kb upstream 2.0kb upstream 6464 true Scaffold594: 54530-60993 Capsella grandiflora
Cagra.0594s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold594: 54530-56529 Capsella grandiflora
Cagra.0594s0014 2.0kb downstream 2.0kb downstream 5007 true Scaffold594: 56530-61536 Capsella grandiflora
Cagra.0594s0014 2.0kb downstream 2.0kb downstream 543 false Scaffold594: 60994-61536 Capsella grandiflora
Cagra.0594s0014 5.0kb upstream 5.0kb upstream 9464 true Scaffold594: 51530-60993 Capsella grandiflora
Cagra.0594s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold594: 51530-56529 Capsella grandiflora
Cagra.0594s0014 5.0kb downstream 5.0kb downstream 5007 true Scaffold594: 56530-61536 Capsella grandiflora
Cagra.0594s0014 5.0kb downstream 5.0kb downstream 543 false Scaffold594: 60994-61536 Capsella grandiflora
Cagra.0594s0014 10.0kb upstream 10.0kb upstream 14464 true Scaffold594: 46530-60993 Capsella grandiflora
Cagra.0594s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold594: 46530-56529 Capsella grandiflora
Cagra.0594s0014 10.0kb downstream 10.0kb downstream 5007 true Scaffold594: 56530-61536 Capsella grandiflora
Cagra.0594s0014 10.0kb downstream 10.0kb downstream 543 false Scaffold594: 60994-61536 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376912 5261 Brassicaceae View MSA
123801395 5264 Brassicales-Malvales View MSA
124298703 5266 SBM View MSA
124150282 5268 Malvidae View MSA
124066732 5270 Rosid View MSA
123736595 5271 Pentapetalae View MSA
122792961 5272 Eudicot View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain