Gene : Cagra.0596s0004 C. grandiflora v1.1
Defline:  (1 of 8) KOG0880 - Peptidyl-prolyl cis-trans isomerase Genomic Order:  4
Name:  ? Cagra.0596s0004 Secondary Identifier:  ? PAC:28920058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0004 0.5kb upstream 0.5kb upstream 3105 true Scaffold596: 10418-13522 Capsella grandiflora
Cagra.0596s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 13023-13522 Capsella grandiflora
Cagra.0596s0004 0.5kb downstream 0.5kb downstream 3105 true Scaffold596: 9918-13022 Capsella grandiflora
Cagra.0596s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 9918-10417 Capsella grandiflora
Cagra.0596s0004 1.0kb upstream 1.0kb upstream 3605 true Scaffold596: 10418-14022 Capsella grandiflora
Cagra.0596s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 13023-14022 Capsella grandiflora
Cagra.0596s0004 1.0kb downstream 1.0kb downstream 3605 true Scaffold596: 9418-13022 Capsella grandiflora
Cagra.0596s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 9418-10417 Capsella grandiflora
Cagra.0596s0004 2.0kb upstream 2.0kb upstream 4605 true Scaffold596: 10418-15022 Capsella grandiflora
Cagra.0596s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 13023-15022 Capsella grandiflora
Cagra.0596s0004 2.0kb downstream 2.0kb downstream 4605 true Scaffold596: 8418-13022 Capsella grandiflora
Cagra.0596s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 8418-10417 Capsella grandiflora
Cagra.0596s0004 5.0kb upstream 5.0kb upstream 7605 true Scaffold596: 10418-18022 Capsella grandiflora
Cagra.0596s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 13023-18022 Capsella grandiflora
Cagra.0596s0004 5.0kb downstream 5.0kb downstream 7605 true Scaffold596: 5418-13022 Capsella grandiflora
Cagra.0596s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 5418-10417 Capsella grandiflora
Cagra.0596s0004 10.0kb upstream 10.0kb upstream 12605 true Scaffold596: 10418-23022 Capsella grandiflora
Cagra.0596s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 13023-23022 Capsella grandiflora
Cagra.0596s0004 10.0kb downstream 10.0kb downstream 12605 true Scaffold596: 418-13022 Capsella grandiflora
Cagra.0596s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 418-10417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381251 5261 Brassicaceae View MSA
123829393 5264 Brassicales-Malvales View MSA
124346317 5266 SBM View MSA
124243935 5268 Malvidae View MSA
124069155 5270 Rosid View MSA
123741646 5271 Pentapetalae View MSA
122794502 5272 Eudicot View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain