Gene : Cagra.0596s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31969:SF3 - GEM-LIKE PROTEIN 5 Genomic Order:  12
Name:  ? Cagra.0596s0012 Secondary Identifier:  ? PAC:28920055
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0012 0.5kb upstream 0.5kb upstream 2028 true Scaffold596: 55586-57613 Capsella grandiflora
Cagra.0596s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 55586-56085 Capsella grandiflora
Cagra.0596s0012 0.5kb downstream 0.5kb downstream 2028 true Scaffold596: 56086-58113 Capsella grandiflora
Cagra.0596s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 57614-58113 Capsella grandiflora
Cagra.0596s0012 1.0kb upstream 1.0kb upstream 2528 true Scaffold596: 55086-57613 Capsella grandiflora
Cagra.0596s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 55086-56085 Capsella grandiflora
Cagra.0596s0012 1.0kb downstream 1.0kb downstream 2528 true Scaffold596: 56086-58613 Capsella grandiflora
Cagra.0596s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 57614-58613 Capsella grandiflora
Cagra.0596s0012 2.0kb upstream 2.0kb upstream 3528 true Scaffold596: 54086-57613 Capsella grandiflora
Cagra.0596s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 54086-56085 Capsella grandiflora
Cagra.0596s0012 2.0kb downstream 2.0kb downstream 3528 true Scaffold596: 56086-59613 Capsella grandiflora
Cagra.0596s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 57614-59613 Capsella grandiflora
Cagra.0596s0012 5.0kb upstream 5.0kb upstream 6528 true Scaffold596: 51086-57613 Capsella grandiflora
Cagra.0596s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 51086-56085 Capsella grandiflora
Cagra.0596s0012 5.0kb downstream 5.0kb downstream 6528 true Scaffold596: 56086-62613 Capsella grandiflora
Cagra.0596s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 57614-62613 Capsella grandiflora
Cagra.0596s0012 10.0kb upstream 10.0kb upstream 11528 true Scaffold596: 46086-57613 Capsella grandiflora
Cagra.0596s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 46086-56085 Capsella grandiflora
Cagra.0596s0012 10.0kb downstream 10.0kb downstream 11528 true Scaffold596: 56086-67613 Capsella grandiflora
Cagra.0596s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 57614-67613 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364885 5261 Brassicaceae View MSA
123841533 5264 Brassicales-Malvales View MSA
124346554 5266 SBM View MSA
124248271 5268 Malvidae View MSA
124071100 5270 Rosid View MSA
123744777 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain