Gene : Cagra.0570s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31008:SF4 - COP1-INTERACTING PROTEIN 7 (CIP7) Genomic Order:  25
Name:  ? Cagra.0570s0025 Secondary Identifier:  ? PAC:28903571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0570s0025 0.5kb upstream 0.5kb upstream 4752 true Scaffold570: 84547-89298 Capsella grandiflora
Cagra.0570s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold570: 88799-89298 Capsella grandiflora
Cagra.0570s0025 0.5kb downstream 0.5kb downstream 4752 true Scaffold570: 84047-88798 Capsella grandiflora
Cagra.0570s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold570: 84047-84546 Capsella grandiflora
Cagra.0570s0025 1.0kb upstream 1.0kb upstream 5252 true Scaffold570: 84547-89798 Capsella grandiflora
Cagra.0570s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold570: 88799-89798 Capsella grandiflora
Cagra.0570s0025 1.0kb downstream 1.0kb downstream 5252 true Scaffold570: 83547-88798 Capsella grandiflora
Cagra.0570s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold570: 83547-84546 Capsella grandiflora
Cagra.0570s0025 2.0kb upstream 2.0kb upstream 6252 true Scaffold570: 84547-90798 Capsella grandiflora
Cagra.0570s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold570: 88799-90798 Capsella grandiflora
Cagra.0570s0025 2.0kb downstream 2.0kb downstream 6252 true Scaffold570: 82547-88798 Capsella grandiflora
Cagra.0570s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold570: 82547-84546 Capsella grandiflora
Cagra.0570s0025 5.0kb upstream 5.0kb upstream 9252 true Scaffold570: 84547-93798 Capsella grandiflora
Cagra.0570s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold570: 88799-93798 Capsella grandiflora
Cagra.0570s0025 5.0kb downstream 5.0kb downstream 9252 true Scaffold570: 79547-88798 Capsella grandiflora
Cagra.0570s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold570: 79547-84546 Capsella grandiflora
Cagra.0570s0025 10.0kb upstream 10.0kb upstream 14252 true Scaffold570: 84547-98798 Capsella grandiflora
Cagra.0570s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold570: 88799-98798 Capsella grandiflora
Cagra.0570s0025 10.0kb downstream 10.0kb downstream 14252 true Scaffold570: 74547-88798 Capsella grandiflora
Cagra.0570s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold570: 74547-84546 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361414 5261 Brassicaceae View MSA
123829868 5264 Brassicales-Malvales View MSA
124342419 5266 SBM View MSA
124239457 5268 Malvidae View MSA
124068447 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain