Gene : Cagra.0570s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11953:SF2 - EXOSOME COMPLEX COMPONENT MTR3 Genomic Order:  18
Name:  ? Cagra.0570s0018 Secondary Identifier:  ? PAC:28903560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0570s0018 0.5kb upstream 0.5kb upstream 2777 true Scaffold570: 64166-66942 Capsella grandiflora
Cagra.0570s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold570: 66443-66942 Capsella grandiflora
Cagra.0570s0018 0.5kb downstream 0.5kb downstream 2777 true Scaffold570: 63666-66442 Capsella grandiflora
Cagra.0570s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold570: 63666-64165 Capsella grandiflora
Cagra.0570s0018 1.0kb upstream 1.0kb upstream 3277 true Scaffold570: 64166-67442 Capsella grandiflora
Cagra.0570s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold570: 66443-67442 Capsella grandiflora
Cagra.0570s0018 1.0kb downstream 1.0kb downstream 3277 true Scaffold570: 63166-66442 Capsella grandiflora
Cagra.0570s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold570: 63166-64165 Capsella grandiflora
Cagra.0570s0018 2.0kb upstream 2.0kb upstream 4277 true Scaffold570: 64166-68442 Capsella grandiflora
Cagra.0570s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold570: 66443-68442 Capsella grandiflora
Cagra.0570s0018 2.0kb downstream 2.0kb downstream 4277 true Scaffold570: 62166-66442 Capsella grandiflora
Cagra.0570s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold570: 62166-64165 Capsella grandiflora
Cagra.0570s0018 5.0kb upstream 5.0kb upstream 7277 true Scaffold570: 64166-71442 Capsella grandiflora
Cagra.0570s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold570: 66443-71442 Capsella grandiflora
Cagra.0570s0018 5.0kb downstream 5.0kb downstream 7277 true Scaffold570: 59166-66442 Capsella grandiflora
Cagra.0570s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold570: 59166-64165 Capsella grandiflora
Cagra.0570s0018 10.0kb upstream 10.0kb upstream 12277 true Scaffold570: 64166-76442 Capsella grandiflora
Cagra.0570s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold570: 66443-76442 Capsella grandiflora
Cagra.0570s0018 10.0kb downstream 10.0kb downstream 12277 true Scaffold570: 54166-66442 Capsella grandiflora
Cagra.0570s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold570: 54166-64165 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365051 5261 Brassicaceae View MSA
123829591 5264 Brassicales-Malvales View MSA
124337850 5266 SBM View MSA
124240916 5268 Malvidae View MSA
124068293 5270 Rosid View MSA
123753440 5271 Pentapetalae View MSA
122790038 5272 Eudicot View MSA
122043786 5273 Angiosperm View MSA
121347270 5274 Embryophyte View MSA
123423845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain