Gene : Cagra.0578s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14222:SF2 - CONDENSIN COMPLEX SUBUNIT 1 Genomic Order:  36
Name:  ? Cagra.0578s0036 Secondary Identifier:  ? PAC:28898755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0036 0.5kb upstream 0.5kb upstream 6669 true Scaffold578: 132467-139135 Capsella grandiflora
Cagra.0578s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 138636-139135 Capsella grandiflora
Cagra.0578s0036 0.5kb downstream 0.5kb downstream 6669 true Scaffold578: 131967-138635 Capsella grandiflora
Cagra.0578s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 131967-132466 Capsella grandiflora
Cagra.0578s0036 1.0kb upstream 1.0kb upstream 7169 true Scaffold578: 132467-139635 Capsella grandiflora
Cagra.0578s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 138636-139635 Capsella grandiflora
Cagra.0578s0036 1.0kb downstream 1.0kb downstream 7169 true Scaffold578: 131467-138635 Capsella grandiflora
Cagra.0578s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 131467-132466 Capsella grandiflora
Cagra.0578s0036 2.0kb upstream 2.0kb upstream 8169 true Scaffold578: 132467-140635 Capsella grandiflora
Cagra.0578s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 138636-140635 Capsella grandiflora
Cagra.0578s0036 2.0kb downstream 2.0kb downstream 8169 true Scaffold578: 130467-138635 Capsella grandiflora
Cagra.0578s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 130467-132466 Capsella grandiflora
Cagra.0578s0036 5.0kb upstream 5.0kb upstream 11169 true Scaffold578: 132467-143635 Capsella grandiflora
Cagra.0578s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 138636-143635 Capsella grandiflora
Cagra.0578s0036 5.0kb downstream 5.0kb downstream 11169 true Scaffold578: 127467-138635 Capsella grandiflora
Cagra.0578s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 127467-132466 Capsella grandiflora
Cagra.0578s0036 10.0kb upstream 10.0kb upstream 16169 true Scaffold578: 132467-148635 Capsella grandiflora
Cagra.0578s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 138636-148635 Capsella grandiflora
Cagra.0578s0036 10.0kb downstream 10.0kb downstream 16169 true Scaffold578: 122467-138635 Capsella grandiflora
Cagra.0578s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 122467-132466 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362767 5261 Brassicaceae View MSA
123834340 5264 Brassicales-Malvales View MSA
124342971 5266 SBM View MSA
124241005 5268 Malvidae View MSA
124061562 5270 Rosid View MSA
123737638 5271 Pentapetalae View MSA
122792109 5272 Eudicot View MSA
122042219 5273 Angiosperm View MSA
121346287 5274 Embryophyte View MSA
123424305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain