Gene : Cagra.0568s0217 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11206:SF79 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  217
Name:  ? Cagra.0568s0217 Secondary Identifier:  ? PAC:28910957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0217 0.5kb upstream 0.5kb upstream 3460 true Scaffold568: 729959-733418 Capsella grandiflora
Cagra.0568s0217 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 729959-730458 Capsella grandiflora
Cagra.0568s0217 0.5kb downstream 0.5kb downstream 3460 true Scaffold568: 730459-733918 Capsella grandiflora
Cagra.0568s0217 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 733419-733918 Capsella grandiflora
Cagra.0568s0217 1.0kb upstream 1.0kb upstream 3960 true Scaffold568: 729459-733418 Capsella grandiflora
Cagra.0568s0217 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 729459-730458 Capsella grandiflora
Cagra.0568s0217 1.0kb downstream 1.0kb downstream 3960 true Scaffold568: 730459-734418 Capsella grandiflora
Cagra.0568s0217 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 733419-734418 Capsella grandiflora
Cagra.0568s0217 2.0kb upstream 2.0kb upstream 4960 true Scaffold568: 728459-733418 Capsella grandiflora
Cagra.0568s0217 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 728459-730458 Capsella grandiflora
Cagra.0568s0217 2.0kb downstream 2.0kb downstream 4960 true Scaffold568: 730459-735418 Capsella grandiflora
Cagra.0568s0217 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 733419-735418 Capsella grandiflora
Cagra.0568s0217 5.0kb upstream 5.0kb upstream 7960 true Scaffold568: 725459-733418 Capsella grandiflora
Cagra.0568s0217 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 725459-730458 Capsella grandiflora
Cagra.0568s0217 5.0kb downstream 5.0kb downstream 7960 true Scaffold568: 730459-738418 Capsella grandiflora
Cagra.0568s0217 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 733419-738418 Capsella grandiflora
Cagra.0568s0217 10.0kb upstream 10.0kb upstream 12960 true Scaffold568: 720459-733418 Capsella grandiflora
Cagra.0568s0217 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 720459-730458 Capsella grandiflora
Cagra.0568s0217 10.0kb downstream 10.0kb downstream 12960 true Scaffold568: 730459-743418 Capsella grandiflora
Cagra.0568s0217 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 733419-743418 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373020 5261 Brassicaceae View MSA
123836545 5264 Brassicales-Malvales View MSA
124345472 5266 SBM View MSA
124244328 5268 Malvidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain