Gene : Cagra.0569s0018 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN Genomic Order:  18
Name:  ? Cagra.0569s0018 Secondary Identifier:  ? PAC:28894969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0569s0018 0.5kb upstream 0.5kb upstream 3562 true Scaffold569: 77813-81374 Capsella grandiflora
Cagra.0569s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold569: 77813-78312 Capsella grandiflora
Cagra.0569s0018 0.5kb downstream 0.5kb downstream 3562 true Scaffold569: 78313-81874 Capsella grandiflora
Cagra.0569s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold569: 81375-81874 Capsella grandiflora
Cagra.0569s0018 1.0kb upstream 1.0kb upstream 4062 true Scaffold569: 77313-81374 Capsella grandiflora
Cagra.0569s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold569: 77313-78312 Capsella grandiflora
Cagra.0569s0018 1.0kb downstream 1.0kb downstream 4062 true Scaffold569: 78313-82374 Capsella grandiflora
Cagra.0569s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold569: 81375-82374 Capsella grandiflora
Cagra.0569s0018 2.0kb upstream 2.0kb upstream 5062 true Scaffold569: 76313-81374 Capsella grandiflora
Cagra.0569s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold569: 76313-78312 Capsella grandiflora
Cagra.0569s0018 2.0kb downstream 2.0kb downstream 5062 true Scaffold569: 78313-83374 Capsella grandiflora
Cagra.0569s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold569: 81375-83374 Capsella grandiflora
Cagra.0569s0018 5.0kb upstream 5.0kb upstream 8062 true Scaffold569: 73313-81374 Capsella grandiflora
Cagra.0569s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold569: 73313-78312 Capsella grandiflora
Cagra.0569s0018 5.0kb downstream 5.0kb downstream 8062 true Scaffold569: 78313-86374 Capsella grandiflora
Cagra.0569s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold569: 81375-86374 Capsella grandiflora
Cagra.0569s0018 10.0kb upstream 10.0kb upstream 13062 true Scaffold569: 68313-81374 Capsella grandiflora
Cagra.0569s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold569: 68313-78312 Capsella grandiflora
Cagra.0569s0018 10.0kb downstream 10.0kb downstream 13062 true Scaffold569: 78313-91374 Capsella grandiflora
Cagra.0569s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold569: 81375-91374 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365330 5261 Brassicaceae View MSA
123827674 5264 Brassicales-Malvales View MSA
124343878 5266 SBM View MSA
124240882 5268 Malvidae View MSA
124064396 5270 Rosid View MSA
123739225 5271 Pentapetalae View MSA
122792517 5272 Eudicot View MSA
122043949 5273 Angiosperm View MSA
121344082 5274 Embryophyte View MSA
123379972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain