Protein Family : 16S rRNA processing protein RimM family 123379972

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  66

66 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29693.t000116 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN R. communis v0.1 7886   29693: 792951-800836
orange1.1g005946m.g (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN C. sinensis v1.1 4504   scaffold00007: 1254864-1259367
AT5G46420 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN A. thaliana TAIR10 2999   Chr5: 18829955-18832953
Thhalv10000812m.g (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN E. salsugineum v1.0 3052   scaffold_20: 1812982-1816033
Ciclev10014510m.g (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN C. clementina v1.0 4443   scaffold_2: 34767189-34771631
Lus10004590.g (1 of 2) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN L. usitatissimum v1.0 3724   scaffold1170: 60542-64265
Lus10011969.g (1 of 2) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN L. usitatissimum v1.0 3475   scaffold931: 21168-24642
Gorai.011G040700 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN G. raimondii v2.1 5543   Chr11: 3016906-3022448
Thecc1EG029565 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN T. cacao v1.1 6582   scaffold_6: 23220338-23226919
Migut.M00959 (1 of 1) PF01782 - RimM N-terminal domain M. guttatus v2.0 3588   scaffold_13: 16232354-16235941
Araha.10139s0003 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN A. halleri v1.1 2972   Scaffold10139: 6971-9942
Cagra.0569s0018 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN C. grandiflora v1.1 3062   Scaffold569: 78313-81374
Glyma.05G164500 (1 of 2) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN G. max Wm82.a2.v1 6845   Chr05: 35525530-35532374
Glyma.08G121900 (1 of 2) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN G. max Wm82.a2.v1 6410   Chr08: 9389955-9396364
Brara.F03621 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN B. rapa FPsc v1.3 2938   A06: 27771019-27773956
Bostr.8819s0180 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN B. stricta v1.2 3021   Scaffold8819: 1293490-1296510
Medtr8g088030 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN M. truncatula Mt4.0v1 6218   chr8: 36435903-36442120
SapurV1A.0126s0130 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN S. purpurea v1.0 7057   chr16: 22257788-22264844
evm_27.TU.AmTr_v1.0_scaffold00086.53 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN A. trichopoda v1.0 44911   AmTr_v1.0_scaffold00086: 1252141-1297051
Traes_1AL_9907E1500 (1 of 1) PF01782//PF05239 - RimM N-terminal domain (RimM) // PRC-barrel domain (PRC) T. aestivum v2.2 5155   ta_iwgsc_1al_v2_3881307: 9482-14636
Traes_1BL_5C7C06485 (1 of 3) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN T. aestivum v2.2 4331   ta_iwgsc_1bl_v1_3809624: 2-4332
Traes_1DL_65E1F2414 (1 of 1) PF01704//PF01782//PF05239 - UTP--glucose-1-phosphate uridylyltransferase (UDPGP) // RimM N-terminal domain (RimM) // PRC-barrel domain (PRC) T. aestivum v2.2 4574   ta_iwgsc_1dl_v1_2274275: 8790-13363
Eucgr.D00343 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN E. grandis v2.0 8395   Chr04: 5926528-5934922
Prupe.4G073700 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN P. persica v2.1 5684   Pp04: 3599032-3604715
GSMUA_Achr8G27110_001 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN M. acuminata v1 8401   chr8: 30374925-30383325
Manes.17G064900 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN M. esculenta v6.1 6097   Chromosome17: 20432200-20438296
Kalax.0142s0063 (1 of 2) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN K. laxiflora v1.1 3601   scaffold_142: 456560-460160
Kalax.0241s0006 (1 of 2) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN K. laxiflora v1.1 3651   scaffold_241: 44138-47788
Sphfalx0139s0047 (1 of 2) 2.7.7.23 - UDP-N-acetylglucosamine diphosphorylase / UDP-N-acetylglucosamine pyrophosphorylase S. fallax v0.5 6044   super_139: 533764-539807
Seita.3G145100 (1 of 1) PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN S. italica v2.2 4482   scaffold_3: 10333650-10338131

66 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29693.m002078 R. communis v0.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
orange1.1g005946m C. sinensis v1.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
AT5G46420.1 A. thaliana TAIR10 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Thhalv10000812m E. salsugineum v1.0 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Ciclev10014510m C. clementina v1.0 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Lus10004590 L. usitatissimum v1.0 123379972 16S rRNA processing protein RimM family 2 5275 Viridiplantae
Lus10011969 L. usitatissimum v1.0 123379972 16S rRNA processing protein RimM family 2 5275 Viridiplantae
Gorai.011G040700.1 G. raimondii v2.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Thecc1EG029565t1 T. cacao v1.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Migut.M00959.1.p M. guttatus v2.0 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Araha.10139s0003.1.p A. halleri v1.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Cagra.0569s0018.1.p C. grandiflora v1.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Glyma.05G164500.1.p G. max Wm82.a2.v1 123379972 16S rRNA processing protein RimM family 2 5275 Viridiplantae
Glyma.08G121900.1.p G. max Wm82.a2.v1 123379972 16S rRNA processing protein RimM family 2 5275 Viridiplantae
Brara.F03621.1.p B. rapa FPsc v1.3 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Bostr.8819s0180.1.p B. stricta v1.2 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Medtr8g088030.1 M. truncatula Mt4.0v1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
SapurV1A.0126s0130.1.p S. purpurea v1.0 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00086.53 A. trichopoda v1.0 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Traes_1AL_9907E1500.2 T. aestivum v2.2 123379972 16S rRNA processing protein RimM family 3 5275 Viridiplantae
Traes_1BL_5C7C06485.2 T. aestivum v2.2 123379972 16S rRNA processing protein RimM family 3 5275 Viridiplantae
Traes_1DL_65E1F2414.2 T. aestivum v2.2 123379972 16S rRNA processing protein RimM family 3 5275 Viridiplantae
Eucgr.D00343.1.p E. grandis v2.0 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Prupe.4G073700.1.p P. persica v2.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
GSMUA_Achr8P27110_001 M. acuminata v1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Manes.17G064900.1.p M. esculenta v6.1 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Kalax.0142s0063.1.p K. laxiflora v1.1 123379972 16S rRNA processing protein RimM family 2 5275 Viridiplantae
Kalax.0241s0006.1.p K. laxiflora v1.1 123379972 16S rRNA processing protein RimM family 2 5275 Viridiplantae
Sphfalx0139s0047.1.p S. fallax v0.5 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae
Seita.3G145100.1.p S. italica v2.2 123379972 16S rRNA processing protein RimM family 1 5275 Viridiplantae