Gene : Cagra.0569s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR17204:SF18 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  16
Name:  ? Cagra.0569s0016 Secondary Identifier:  ? PAC:28894965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0569s0016 0.5kb upstream 0.5kb upstream 4463 true Scaffold569: 68401-72863 Capsella grandiflora
Cagra.0569s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold569: 68401-68900 Capsella grandiflora
Cagra.0569s0016 0.5kb downstream 0.5kb downstream 4463 true Scaffold569: 68901-73363 Capsella grandiflora
Cagra.0569s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold569: 72864-73363 Capsella grandiflora
Cagra.0569s0016 1.0kb upstream 1.0kb upstream 4963 true Scaffold569: 67901-72863 Capsella grandiflora
Cagra.0569s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold569: 67901-68900 Capsella grandiflora
Cagra.0569s0016 1.0kb downstream 1.0kb downstream 4963 true Scaffold569: 68901-73863 Capsella grandiflora
Cagra.0569s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold569: 72864-73863 Capsella grandiflora
Cagra.0569s0016 2.0kb upstream 2.0kb upstream 5963 true Scaffold569: 66901-72863 Capsella grandiflora
Cagra.0569s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold569: 66901-68900 Capsella grandiflora
Cagra.0569s0016 2.0kb downstream 2.0kb downstream 5963 true Scaffold569: 68901-74863 Capsella grandiflora
Cagra.0569s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold569: 72864-74863 Capsella grandiflora
Cagra.0569s0016 5.0kb upstream 5.0kb upstream 8963 true Scaffold569: 63901-72863 Capsella grandiflora
Cagra.0569s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold569: 63901-68900 Capsella grandiflora
Cagra.0569s0016 5.0kb downstream 5.0kb downstream 8963 true Scaffold569: 68901-77863 Capsella grandiflora
Cagra.0569s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold569: 72864-77863 Capsella grandiflora
Cagra.0569s0016 10.0kb upstream 10.0kb upstream 13963 true Scaffold569: 58901-72863 Capsella grandiflora
Cagra.0569s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold569: 58901-68900 Capsella grandiflora
Cagra.0569s0016 10.0kb downstream 10.0kb downstream 13963 true Scaffold569: 68901-82863 Capsella grandiflora
Cagra.0569s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold569: 72864-82863 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363665 5261 Brassicaceae View MSA
123829363 5264 Brassicales-Malvales View MSA
124338828 5266 SBM View MSA
124244228 5268 Malvidae View MSA
124069199 5270 Rosid View MSA
123753236 5271 Pentapetalae View MSA
122790404 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain