Gene : Cagra.0570s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10527:SF6 - IMPORTIN-4 Genomic Order:  3
Name:  ? Cagra.0570s0003 Secondary Identifier:  ? PAC:28903541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0570s0003 0.5kb upstream 0.5kb upstream 6329 true Scaffold570: 7831-14159 Capsella grandiflora
Cagra.0570s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold570: 7831-8330 Capsella grandiflora
Cagra.0570s0003 0.5kb downstream 0.5kb downstream 6329 true Scaffold570: 8331-14659 Capsella grandiflora
Cagra.0570s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold570: 14160-14659 Capsella grandiflora
Cagra.0570s0003 1.0kb upstream 1.0kb upstream 6829 true Scaffold570: 7331-14159 Capsella grandiflora
Cagra.0570s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold570: 7331-8330 Capsella grandiflora
Cagra.0570s0003 1.0kb downstream 1.0kb downstream 6829 true Scaffold570: 8331-15159 Capsella grandiflora
Cagra.0570s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold570: 14160-15159 Capsella grandiflora
Cagra.0570s0003 2.0kb upstream 2.0kb upstream 7829 true Scaffold570: 6331-14159 Capsella grandiflora
Cagra.0570s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold570: 6331-8330 Capsella grandiflora
Cagra.0570s0003 2.0kb downstream 2.0kb downstream 7829 true Scaffold570: 8331-16159 Capsella grandiflora
Cagra.0570s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold570: 14160-16159 Capsella grandiflora
Cagra.0570s0003 5.0kb upstream 5.0kb upstream 10829 true Scaffold570: 3331-14159 Capsella grandiflora
Cagra.0570s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold570: 3331-8330 Capsella grandiflora
Cagra.0570s0003 5.0kb downstream 5.0kb downstream 10829 true Scaffold570: 8331-19159 Capsella grandiflora
Cagra.0570s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold570: 14160-19159 Capsella grandiflora
Cagra.0570s0003 10.0kb upstream 10.0kb upstream 14159 true Scaffold570: 1-14159 Capsella grandiflora
Cagra.0570s0003 10.0kb upstream 10.0kb upstream 8330 false Scaffold570: 1-8330 Capsella grandiflora
Cagra.0570s0003 10.0kb downstream 10.0kb downstream 15829 true Scaffold570: 8331-24159 Capsella grandiflora
Cagra.0570s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold570: 14160-24159 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377534 5261 Brassicaceae View MSA
123839336 5264 Brassicales-Malvales View MSA
124341500 5266 SBM View MSA
124238965 5268 Malvidae View MSA
124072695 5270 Rosid View MSA
123744874 5271 Pentapetalae View MSA
122785605 5272 Eudicot View MSA
122049923 5273 Angiosperm View MSA
123429119 5275 Viridiplantae View MSA
121344058 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain