Gene : Cagra.0570s0006 C. grandiflora v1.1
Genomic Order:  6 Name:  ? Cagra.0570s0006
Secondary Identifier:  ? PAC:28903537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0570s0006 0.5kb upstream 0.5kb upstream 3670 true Scaffold570: 22541-26210 Capsella grandiflora
Cagra.0570s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold570: 22541-23040 Capsella grandiflora
Cagra.0570s0006 0.5kb downstream 0.5kb downstream 3670 true Scaffold570: 23041-26710 Capsella grandiflora
Cagra.0570s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold570: 26211-26710 Capsella grandiflora
Cagra.0570s0006 1.0kb upstream 1.0kb upstream 4170 true Scaffold570: 22041-26210 Capsella grandiflora
Cagra.0570s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold570: 22041-23040 Capsella grandiflora
Cagra.0570s0006 1.0kb downstream 1.0kb downstream 4170 true Scaffold570: 23041-27210 Capsella grandiflora
Cagra.0570s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold570: 26211-27210 Capsella grandiflora
Cagra.0570s0006 2.0kb upstream 2.0kb upstream 5170 true Scaffold570: 21041-26210 Capsella grandiflora
Cagra.0570s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold570: 21041-23040 Capsella grandiflora
Cagra.0570s0006 2.0kb downstream 2.0kb downstream 5170 true Scaffold570: 23041-28210 Capsella grandiflora
Cagra.0570s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold570: 26211-28210 Capsella grandiflora
Cagra.0570s0006 5.0kb upstream 5.0kb upstream 8170 true Scaffold570: 18041-26210 Capsella grandiflora
Cagra.0570s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold570: 18041-23040 Capsella grandiflora
Cagra.0570s0006 5.0kb downstream 5.0kb downstream 8170 true Scaffold570: 23041-31210 Capsella grandiflora
Cagra.0570s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold570: 26211-31210 Capsella grandiflora
Cagra.0570s0006 10.0kb upstream 10.0kb upstream 13170 true Scaffold570: 13041-26210 Capsella grandiflora
Cagra.0570s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold570: 13041-23040 Capsella grandiflora
Cagra.0570s0006 10.0kb downstream 10.0kb downstream 13170 true Scaffold570: 23041-36210 Capsella grandiflora
Cagra.0570s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold570: 26211-36210 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369976 5261 Brassicaceae View MSA
123836585 5264 Brassicales-Malvales View MSA
124336745 5266 SBM View MSA
124253294 5268 Malvidae View MSA
124060418 5270 Rosid View MSA
123736599 5271 Pentapetalae View MSA
122792685 5272 Eudicot View MSA
122045033 5273 Angiosperm View MSA
121310389 5274 Embryophyte View MSA
123347885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain