Gene : Cagra.0799s0105 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32002:SF6 - PROTEIN NLP4-RELATED Genomic Order:  105
Name:  ? Cagra.0799s0105 Secondary Identifier:  ? PAC:28899117
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0105 0.5kb upstream 0.5kb upstream 4033 true Scaffold799: 408652-412684 Capsella grandiflora
Cagra.0799s0105 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 408652-409151 Capsella grandiflora
Cagra.0799s0105 0.5kb downstream 0.5kb downstream 4033 true Scaffold799: 409152-413184 Capsella grandiflora
Cagra.0799s0105 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 412685-413184 Capsella grandiflora
Cagra.0799s0105 1.0kb upstream 1.0kb upstream 4533 true Scaffold799: 408152-412684 Capsella grandiflora
Cagra.0799s0105 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 408152-409151 Capsella grandiflora
Cagra.0799s0105 1.0kb downstream 1.0kb downstream 4533 true Scaffold799: 409152-413684 Capsella grandiflora
Cagra.0799s0105 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 412685-413684 Capsella grandiflora
Cagra.0799s0105 2.0kb upstream 2.0kb upstream 5533 true Scaffold799: 407152-412684 Capsella grandiflora
Cagra.0799s0105 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 407152-409151 Capsella grandiflora
Cagra.0799s0105 2.0kb downstream 2.0kb downstream 5533 true Scaffold799: 409152-414684 Capsella grandiflora
Cagra.0799s0105 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 412685-414684 Capsella grandiflora
Cagra.0799s0105 5.0kb upstream 5.0kb upstream 8533 true Scaffold799: 404152-412684 Capsella grandiflora
Cagra.0799s0105 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 404152-409151 Capsella grandiflora
Cagra.0799s0105 5.0kb downstream 5.0kb downstream 8533 true Scaffold799: 409152-417684 Capsella grandiflora
Cagra.0799s0105 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 412685-417684 Capsella grandiflora
Cagra.0799s0105 10.0kb upstream 10.0kb upstream 13533 true Scaffold799: 399152-412684 Capsella grandiflora
Cagra.0799s0105 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 399152-409151 Capsella grandiflora
Cagra.0799s0105 10.0kb downstream 10.0kb downstream 13533 true Scaffold799: 409152-422684 Capsella grandiflora
Cagra.0799s0105 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 412685-422684 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371925 5261 Brassicaceae View MSA
123840676 5264 Brassicales-Malvales View MSA
124322768 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain