Gene : Cagra.0769s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11599:SF14 - PROTEASOME SUBUNIT ALPHA TYPE-5 Genomic Order:  3
Name:  ? Cagra.0769s0003 Secondary Identifier:  ? PAC:28912548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0769s0003 0.5kb upstream 0.5kb upstream 2559 true Scaffold769: 5777-8335 Capsella grandiflora
Cagra.0769s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold769: 7836-8335 Capsella grandiflora
Cagra.0769s0003 0.5kb downstream 0.5kb downstream 2559 true Scaffold769: 5277-7835 Capsella grandiflora
Cagra.0769s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold769: 5277-5776 Capsella grandiflora
Cagra.0769s0003 1.0kb upstream 1.0kb upstream 3059 true Scaffold769: 5777-8835 Capsella grandiflora
Cagra.0769s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold769: 7836-8835 Capsella grandiflora
Cagra.0769s0003 1.0kb downstream 1.0kb downstream 3059 true Scaffold769: 4777-7835 Capsella grandiflora
Cagra.0769s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold769: 4777-5776 Capsella grandiflora
Cagra.0769s0003 2.0kb upstream 2.0kb upstream 4059 true Scaffold769: 5777-9835 Capsella grandiflora
Cagra.0769s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold769: 7836-9835 Capsella grandiflora
Cagra.0769s0003 2.0kb downstream 2.0kb downstream 4059 true Scaffold769: 3777-7835 Capsella grandiflora
Cagra.0769s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold769: 3777-5776 Capsella grandiflora
Cagra.0769s0003 5.0kb upstream 5.0kb upstream 7059 true Scaffold769: 5777-12835 Capsella grandiflora
Cagra.0769s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold769: 7836-12835 Capsella grandiflora
Cagra.0769s0003 5.0kb downstream 5.0kb downstream 7059 true Scaffold769: 777-7835 Capsella grandiflora
Cagra.0769s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold769: 777-5776 Capsella grandiflora
Cagra.0769s0003 10.0kb upstream 10.0kb upstream 12059 true Scaffold769: 5777-17835 Capsella grandiflora
Cagra.0769s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold769: 7836-17835 Capsella grandiflora
Cagra.0769s0003 10.0kb downstream 10.0kb downstream 7835 true Scaffold769: 1-7835 Capsella grandiflora
Cagra.0769s0003 10.0kb downstream 10.0kb downstream 5776 false Scaffold769: 1-5776 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379304 5261 Brassicaceae View MSA
123840672 5264 Brassicales-Malvales View MSA
124336994 5266 SBM View MSA
124242930 5268 Malvidae View MSA
124064376 5270 Rosid View MSA
123750167 5271 Pentapetalae View MSA
122792406 5272 Eudicot View MSA
122044195 5273 Angiosperm View MSA
121347663 5274 Embryophyte View MSA
123428199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain