Gene : Cagra.0796s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Genomic Order:  13
Name:  ? Cagra.0796s0013 Secondary Identifier:  ? PAC:28902465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0796s0013 0.5kb upstream 0.5kb upstream 3440 true Scaffold796: 32738-36177 Capsella grandiflora
Cagra.0796s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold796: 32738-33237 Capsella grandiflora
Cagra.0796s0013 0.5kb downstream 0.5kb downstream 3440 true Scaffold796: 33238-36677 Capsella grandiflora
Cagra.0796s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold796: 36178-36677 Capsella grandiflora
Cagra.0796s0013 1.0kb upstream 1.0kb upstream 3940 true Scaffold796: 32238-36177 Capsella grandiflora
Cagra.0796s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold796: 32238-33237 Capsella grandiflora
Cagra.0796s0013 1.0kb downstream 1.0kb downstream 3940 true Scaffold796: 33238-37177 Capsella grandiflora
Cagra.0796s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold796: 36178-37177 Capsella grandiflora
Cagra.0796s0013 2.0kb upstream 2.0kb upstream 4940 true Scaffold796: 31238-36177 Capsella grandiflora
Cagra.0796s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold796: 31238-33237 Capsella grandiflora
Cagra.0796s0013 2.0kb downstream 2.0kb downstream 4940 true Scaffold796: 33238-38177 Capsella grandiflora
Cagra.0796s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold796: 36178-38177 Capsella grandiflora
Cagra.0796s0013 5.0kb upstream 5.0kb upstream 7940 true Scaffold796: 28238-36177 Capsella grandiflora
Cagra.0796s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold796: 28238-33237 Capsella grandiflora
Cagra.0796s0013 5.0kb downstream 5.0kb downstream 7940 true Scaffold796: 33238-41177 Capsella grandiflora
Cagra.0796s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold796: 36178-41177 Capsella grandiflora
Cagra.0796s0013 10.0kb upstream 10.0kb upstream 12940 true Scaffold796: 23238-36177 Capsella grandiflora
Cagra.0796s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold796: 23238-33237 Capsella grandiflora
Cagra.0796s0013 10.0kb downstream 10.0kb downstream 12940 true Scaffold796: 33238-46177 Capsella grandiflora
Cagra.0796s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold796: 36178-46177 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040922 5273 Angiosperm View MSA
122363776 5261 Brassicaceae View MSA
123798609 5264 Brassicales-Malvales View MSA
124346722 5266 SBM View MSA
124250262 5268 Malvidae View MSA
124064207 5270 Rosid View MSA
123751329 5271 Pentapetalae View MSA
122792829 5272 Eudicot View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain