Gene : Cagra.0796s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31499:SF5 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  26
Name:  ? Cagra.0796s0026 Secondary Identifier:  ? PAC:28902476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0796s0026 0.5kb upstream 0.5kb upstream 2198 true Scaffold796: 91872-94069 Capsella grandiflora
Cagra.0796s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold796: 91872-92371 Capsella grandiflora
Cagra.0796s0026 0.5kb downstream 0.5kb downstream 2198 true Scaffold796: 92372-94569 Capsella grandiflora
Cagra.0796s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold796: 94070-94569 Capsella grandiflora
Cagra.0796s0026 1.0kb upstream 1.0kb upstream 2698 true Scaffold796: 91372-94069 Capsella grandiflora
Cagra.0796s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold796: 91372-92371 Capsella grandiflora
Cagra.0796s0026 1.0kb downstream 1.0kb downstream 2698 true Scaffold796: 92372-95069 Capsella grandiflora
Cagra.0796s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold796: 94070-95069 Capsella grandiflora
Cagra.0796s0026 2.0kb upstream 2.0kb upstream 3698 true Scaffold796: 90372-94069 Capsella grandiflora
Cagra.0796s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold796: 90372-92371 Capsella grandiflora
Cagra.0796s0026 2.0kb downstream 2.0kb downstream 3698 true Scaffold796: 92372-96069 Capsella grandiflora
Cagra.0796s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold796: 94070-96069 Capsella grandiflora
Cagra.0796s0026 5.0kb upstream 5.0kb upstream 6698 true Scaffold796: 87372-94069 Capsella grandiflora
Cagra.0796s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold796: 87372-92371 Capsella grandiflora
Cagra.0796s0026 5.0kb downstream 5.0kb downstream 6698 true Scaffold796: 92372-99069 Capsella grandiflora
Cagra.0796s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold796: 94070-99069 Capsella grandiflora
Cagra.0796s0026 10.0kb upstream 10.0kb upstream 11698 true Scaffold796: 82372-94069 Capsella grandiflora
Cagra.0796s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold796: 82372-92371 Capsella grandiflora
Cagra.0796s0026 10.0kb downstream 10.0kb downstream 11698 true Scaffold796: 92372-104069 Capsella grandiflora
Cagra.0796s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold796: 94070-104069 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371764 5261 Brassicaceae View MSA
123831031 5264 Brassicales-Malvales View MSA
124340713 5266 SBM View MSA
124241585 5268 Malvidae View MSA
124073439 5270 Rosid View MSA
123741048 5271 Pentapetalae View MSA
122787904 5272 Eudicot View MSA
122042666 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain